Anders Gorm Pedersen

Anders Gorm Pedersen

Docent

DTU SYSTEMBIOLOGI
Institut for Systembiologi

Center for Biological Sequence Analysis

Danmarks Tekniske Universitet

Kemitorvet

Bygning 208, rum 017

2800 Lyngby

Tlf.
Tlf.
Fax 45 93 15 85
E-mail gorm@cbs.dtu.dk
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Publikationer
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2014
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DNA secondary structures are associated with recombination in major Plasmodium falciparum variable surface antigen gene families

Sander, Adam F. ; Lavstsen, Thomas ; Rask, Thomas Salhøj ; Lisby, Michael ; Salanti, Ali ; Fordyce, Sarah L. ; Jespersen, Jakob S. ; Carter, Richard ; Deitsch, Kirk W. ; Theander, Thor G. ; Pedersen, Anders Gorm ; Arnot, David E.
in journal: Nucleic Acids Research (ISSN: 03051048) (DOI: http://dx.doi.org/10.1093/nar/gkt1174), vol: 42, issue: 4, pages: 202270-2281, 2014

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2014     |    DOI: http://dx.doi.org/10.1093/nar/gkt1174

 

Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes

Nielsen, Henrik Bjørn ; Almeida, Mathieu ; Juncker, Agnieszka ; Rasmussen, Simon ; Li, Junhua ; Sunagawa, Shinichi ; Plichta, Damian Rafal ; Gautier, Laurent ; Pedersen, Anders Gorm ; Emmanuelle, Le Chatelier ; Pelletier, Eric ; Bonde, Ida ; Nielsen, Trine ; Manichanh, Chaysavanh ; Arumugam, Manimozhiyan ; Batto, Jean-Michel ; dos Santos, Marcelo Bertalan Quintanilha ; Blom, Nikolaj ; Borruel, Natalia ; Burgdorf, Kristoffer S. ; Boumezbeur, Fouad ; Casellas, Francesc ; Doré, Joël ; Dworzynski, Piotr ; Guarner, Francisco ; Hansen, Torben ; Hildebrand, Falk ; Kaas, Rolf Sommer ; Kennedy, Sean ; Kristiansen, Karsten ; Kultima, Jens Roat ; Léonard, Pierre ; Levenez, Florence ; Lund, Ole ; Moumen, Bouziane ; Denis, Le Paslier ; Pons, Nicolas ; Pedersen, Oluf ; Prifti, Edi ; Qin, Junjie ; Raes, Jeroen ; Sørensen, Søren ; Tap, Julien ; Tims, Sebastian ; Ussery, David ; Yamada, Takuji ; Renault, Pierre ; Sicheritz-Pontén, Thomas ; Bork, Peer ; Wang, Jun ; Brunak, Søren ; Ehrlich, S. Dusko
in journal: Nature Biotechnology (ISSN: 1087-0156) (DOI: http://dx.doi.org/10.1038/nbt.2939), 2014

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2014     |    DOI: http://dx.doi.org/10.1038/nbt.2939

 

Rescue of the highly virulent classical swine fever virus strain “Koslov” from cloned cDNA and first insights into genome variations relevant for virulence

Fahnøe, Ulrik ; Pedersen, Anders Gorm ; Risager, Peter Christian ; Nielsen, Jens ; Belsham, Graham ; Höper, Dirk ; Beer, Martin ; Rasmussen, Thomas Bruun
in journal: Virology (ISSN: 0042-6822) (DOI: http://dx.doi.org/10.1016/j.virol.2014.08.021), vol: 468-470, pages: 379-387, 2014

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2014     |    DOI: http://dx.doi.org/10.1016/j.virol.2014.08.021

2013
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Reconstructing the highly virulent Classical Swine Fever Virus strain Koslov

Fahnøe, Ulrik ; Pedersen, Anders Gorm ; Nielsen, Jens ; Höper, Dirk ; Beer, Martin ; Rasmussen, Thomas Bruun
Presented at:
SMBE 2013 – Annual Meeting of the Society for Molecular Biology and Evolution, 2013, Chicago, IL

Type: Conference abstract for conference (Peer reviewed)

Status: Published     |    År: 2013

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Comparison of two Next Generation sequencing platforms for full genome sequencing of Classical Swine Fever Virus

Fahnøe, Ulrik ; Pedersen, Anders Gorm ; Höper, Dirk ; Beer, Martin ; Rasmussen, Thomas Bruun
part of: ABSTRACTS, pages: 124, 2013,
Presented at:
7th Annual Meeting EPIZONE, 2013, Brussels

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    År: 2013

2012
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Bayesian prediction of bacterial growth temperature range based on genome sequences

Jensen, Dan Børge ; Vesth, Tammi Camilla ; Hallin, Peter Fischer ; Pedersen, Anders Gorm ; Ussery, David
part of: Eleventh International Conference on Bioinformatics (InCoB2012): Computational Biology, 2012,
Presented at:
Asia Pacific Bioin11th International Conference on Bioinformatics (InCoB), 2012, Bangkok

Type: Article in proceedings (Peer reviewed)

Status: Published     |    År: 2012     |    DOI: http://dx.doi.org/10.1186/1471-2164-13-S7-S3

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Bioinformatics approaches to malaria

Hansen, Daniel Aaen ; Pedersen, Anders Gorm (Main supervisor)
Technical University of Denmark, pages: 135

Type: Ph.D. thesis

Status: Published     |    År: 2012

2011
 

Experience with the use of online lectures, video Modules, and wiki-websites in engineering education

Pedersen, Anders Gorm ; Wernersson, Rasmus
part of: 7th International CDIO Conference 2011, 2011, Technical University of Denmark,
Presented at:
7th International CDIO Conference, 2011, Copenhagen

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    År: 2011

2010
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Plasmodium falciparum Erythrocyte Membrane Protein 1 Diversity in Seven Genomes – Divide and Conquer

Rask, Thomas Salhøj ; Hansen, Daniel Aaen ; Theander, Thor G. ; Pedersen, Anders Gorm ; Lavstsen, Thomas
in journal: P L o S Computational Biology (ISSN: 1553-734X) (DOI: http://dx.doi.org/10.1371/journal.pcbi.1000933), vol: 6, issue: 9, 2010

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2010     |    DOI: http://dx.doi.org/10.1371/journal.pcbi.1000933

2009
 

InterMap3D: predicting and visualizing co-evolving protein residues

Oliveira, Rodrigo Gouveia ; Roque, francisco jose sousa simôes almeida ; Wernersson, Rasmus ; Sicheritz-Pontén, Thomas ; Sackett, Peter Wad ; Mølgaard, Anne ; Pedersen, Anders Gorm
in journal: Bioinformatics (ISSN: 1367-4803) (DOI: http://dx.doi.org/10.1093/bioinformatics/btp335), vol: 25, issue: 15, pages: 1963-1965, 2009

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2009     |    DOI: http://dx.doi.org/10.1093/bioinformatics/btp335