Haja Kadarmideen

Haja Kadarmideen

Institutdirektør, Professor

DTU BIOINFORMATIK
Institut for Bio- og Sundhedsinformatik

Administration
DTU Bioinformatics Employees
Quantitative and Systems Genomics

Danmarks Tekniske Universitet

Kemitorvet

Bygning 208, rum 007

2800 Kgs. Lyngby

Hjemmeside

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Publikationer
Projekter
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Publikationer rss feed

2017
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Single nucleotide polymorphism discovery in bovine liver using RNA-seq technology

Pareek, Chandra Shekhar ; Błaszczyk, Paweł ; Dziuba, Piotr ; Czarnik, Urszula ; Fraser, Leyland ; Sobiech, Przemysław ; Pierzchała, Mariusz ; Feng, Yaping ; Kadarmideen, Haja ; Kumar, Dibyendu
in journal: P L o S One (ISSN: 1932-6203) (DOI: http://dx.doi.org/10.1371/journal.pone.0172687), vol: 12, issue: 2, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.1371/journal.pone.0172687

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RNA-Seq transcriptomics and pathway analyses reveal potential regulatory genes and molecular mechanisms in high- and low-residual feed intake in Nordic dairy cattle

Salleh, M. S. ; Mazzoni, G. ; Höglund, J. K. ; Olijhoek, D. W. ; Lund, P. ; Løvendahl, P. ; Kadarmideen, Haja
in journal: B M C Genomics (ISSN: 1471-2164) (DOI: http://dx.doi.org/10.1186/s12864-017-3622-9), vol: 18, issue: 1, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.1186/s12864-017-3622-9

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Identification of potential biomarkers in donor cows for in vitro embryo production by granulosa cell transcriptomics

Mazzoni, Gianluca ; Salleh, Suraya M ; Freude, Kristine ; Pedersen, Hanne S. ; Stroebech, Lotte ; Callesen, Henrik ; Hyttel, Poul ; Kadarmideen, Haja ; Óvilo, Cristina (Editor)
in journal: P L o S One (ISSN: 1932-6203) (DOI: http://dx.doi.org/10.1371/journal.pone.0175464), vol: 12, issue: 4, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.1371/journal.pone.0175464

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A genome-wide association study of thyroid stimulating hormone and free thyroxine in Danish children and adolescents

Nielsen, Tenna Ruest Haarmark ; Appel, Emil Vincent Rosenbaum ; Svendstrup, Mathilde ; Ohrt, Johanne Dam ; Dahl, Maria ; Fonvig, Cilius Esmann ; Hollensted, Mette ; Have, Christian Theil ; Kadarmideen, Haja ; Pedersen, Oluf ; Hansen, Torben ; Holm, Jens-Christian ; Grarup, Niels ; Meyre, David (Editor)
in journal: P L o S One (ISSN: 1932-6203) (DOI: http://dx.doi.org/10.1371/journal.pone.0174204), vol: 12, issue: 3, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.1371/journal.pone.0174204

 

In vitro production of bovine embryos: cumulus/granulosa cell gene expression patterns point to early atresia as beneficial for oocyte competence

Mazzoni, Gianluca ; Razza, Eduardo ; Pedersen, Hanne S. ; Secher, Jan ; Kadarmideen, Haja ; Callesen, Henrik ; Stroebech, Lotte ; Freude, Kristine ; Hyttel, Poul
part of: Proceedings of the 31th Annual Meeting of the Brazilian Embryo Technology Society (SBTE), pages: 482-489, 2017,
Presented at:
31st Annual Meeting of the Brazilian Embryo Technology Society, 2017

Type: Article in proceedings (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.21451/1984-3143-AR990

 

Application of integrative genomics and systems biology to conventional and in vitro reproductive traits in cattle

Mazzoni, Gianluca ; Pedersen, Hanne S. ; de Oliveira Junior, Gerson A. ; Alexandre, Pamela ; Razza, Eduardo M. ; Callesen, Henrik ; Hyttel, Poul ; Nogueira, Marcelo F. G. ; Ferraz, Jose Bento S. ; Kadarmideen, Haja
part of: Proceedings of the 31st Annual Meeting of the Brazilian Embryo Technology Society (SBTE), pages: 507-513, 2017,
Presented at:
31st Annual Meeting of the Brazilian Embryo Technology Society, 2017

Type: Article in proceedings (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.21451/1984-3143-AR993

 

Basic and practical aspects of pregnancy establishment in cattle

Pedersen, Hanne Skovsgaard ; Mazzoni, Gianluca ; Stroebech, Lotte ; Kadarmideen, Haja ; Hyttel, Poul ; Callesen, Henrik
part of: Proceedings of the 31st Annual Meeting of the Brazilian Embryo Technology Society (SBTE);, pages: 581-588, 2017,
Presented at:
31st Annual Meeting of the Brazilian Embryo Technology Society, 2017

Type: Article in proceedings (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.21451/1984-3143-AR1001

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Differential expression and co-expression gene networks reveal candidate biomarkers of boar taint in non-castrated pigs

Drag, Markus ; Skinkyté-Juskiené, Ruta ; Do, Duy N. ; Kogelman, Lisette J. A. ; Kadarmideen, Haja
in journal: Scientific Reports (ISSN: 2045-2322) (DOI: http://dx.doi.org/10.1038/s41598-017-11928-0), vol: 7, issue: 1, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.1038/s41598-017-11928-0