DTU Sundhedsteknologi
DTU Bioinformatik
Lars Rønn Olsen

Lars Rønn Olsen

Lektor

Institut for Bio- og Sundhedsinformatik

Cancer Genomics
DTU Bioinformatics Employees

Danmarks Tekniske Universitet

Kemitorvet

Bygning 208, rum 015

2800 Kgs. Lyngby

Tlf.
Tlf.
Fax 45 93 15 85
E-mail lro@bioinformatics.dtu.dk
Hjemmeside

Få tilsendt vCard på e-mail.

Publikationer
Projekter
Kurser
DTU nyheder
Loading

Publikationer rss feed

2019
 

Computational Methods for Identification of T Cell Neoepitopes in Tumors

Jurtz, Vanessa Isabell ; Olsen, Lars Rønn
part of: Cancer Bioinformatics, pages: 157-172, 2019, Springer

Type: Book chapter (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1007/978-1-4939-8868-6_9

2018
 

Clonal analysis of Salmonella-specific effector T cells reveals serovar-specific and cross-reactive T cell responses

Napolitani, Giorgio ; Kurupati, Prathiba ; Teng, Karen Wei Weng ; Gibani, Malick M. ; Rei, Margarida ; Aulicino, Anna ; Preciado-Llanes, Lorena ; Wong, Michael Thomas ; Becht, Etienne ; Howson, Lauren ; de Haas, Paola ; Salio, Mariolina ; Blohmke, Christoph J. ; Olsen, Lars Rønn ; Pinto, David Miguel Susano ; Scifo, Laura ; Jones, Claire ; Dobinson, Hazel ; Campbell, Danielle ; Juel, Helene B. ; Thomaides-Brears, Helena ; Pickard, Derek ; Bumann, Dirk ; Baker, Stephen ; Dougan, Gordon ; Simmons, Alison ; Gordon, Melita A. ; Newell, Evan William ; Pollard, Andrew J. ; Cerundolo, Vincenzo
in: Nature Immunology, vol: 19, issue: 7, pages: 1-13

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1038/s41590-018-0133-z

  PDF

Comparison of CyTOF assays across sites: Results of a six-center pilot study

Leipold, Michael D. ; Obermoser, Gerlinde ; Fenwick, Craig ; Kleinstuber, Katja ; Rashidi, Narges ; McNevin, John P. ; Nau, Allison N. ; Wagar, Lisa E. ; Rozot, Virginie ; Davis, Mark M. ; DeRosa, Stephen ; Pantaleo, Giuseppe ; Scriba, Thomas J. ; Walker, Bruce D. ; Olsen, Lars R. ; Maecker, Holden T.
in: Journal of Immunological Methods, vol: 453, pages: 37-43

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1016/j.jim.2017.11.008

 

Molecular profiling of short-term and long-term surviving patients identifies CD34 mRNA level as prognostic for glioblastoma survival

Michaelsen, Signe Regner ; Urup, Thomas ; Olsen, Lars Rønn ; Broholm, Helle ; Lassen, Ulrik ; Poulsen, Hans Skovgaard
in: Journal of Neuro-Oncology, vol: 137, issue: 3, pages: 533-542

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1007/s11060-017-2739-7

 

Neoantigen vaccine generates intratumoral T cell responses in phase Ib glioblastoma trial

Keskin, Derin B. ; Anandappa, Annabelle J. ; Sun, Jing ; Tirosh, Itay ; Mathewson, Nathan D. ; Li, Shuqiang ; Oliveira, Giacomo ; Giobbie-Hurder, Anita ; Felt, Kristen ; Gjini, Evisa ; Shukla, Sachet A. ; Hu, Zhuting ; Li, Letitia ; Le, Phuong M. ; Allesøe, Rosa Lundbye ; Richman, Alyssa R. ; Kowalczyk, Monika S ; Abdelrahman, Sara ; Geduldig, Jack E. ; Charbonneau, Sarah ; Pelton, Kristine ; Iorgulescu, J. Bryan ; Elagina, Liudmila ; Zhang, Wandi ; Olive, Oriol ; McCluskey, Christine ; Olsen, Lars Rønn ; Stevens, Jonathan ; Lane, William J. ; Salazar, Andres M. ; Daley, Heather ; Wen, Patrick Y. ; Chiocca, E. Antonio ; Harden, Maegan ; Lennon, Niall J. ; Gabriel, Stacey ; Getz, Gad ; Lander, Eric S. ; Regev, Aviv ; Ritz, Jerome ; Neuberg, Donna ; Rodig, Scott J. ; Ligon, Keith L. ; Suvà, Mario L. ; Wucherpfennig, Kai W. ; Hacohen, Nir ; Fritsch, Edward F. ; Livak, Kenneth J ; Ott, Patrick A ; Wu, Catherine J ; Reardon, David A.
in: Nature, vol: 565, pages: 234-239

Type: Letter (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1038/s41586-018-0792-9

 

The anatomy of single cell mass cytometry data

Olsen, Lars Rønn ; Leipold, Michael D. ; Pedersen, Christina B. ; Maecker, Holden Terry
in: Cytometry. Part A

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    År: 2018     |    DOI: https://doi.org/10.1002/cyto.a.23621

  PDF

Using microarray-based subtyping methods for breast cancer in the era of high-throughput RNA sequencing

Pedersen, Christina Bligaard ; Nielsen, Finn Cilius ; Rossing, Maria ; Olsen, Lars Rønn
in: Molecular Oncology, vol: 12, issue: 12, pages: 2136-2146

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1002/1878-0261.12389

2017
 

PATH-01. Identification of Prognastic Variables Based on Molecular Profiling of Long-Term and Short-Term Surviving Gglioblastoma Patients

Michaelsen, Signe Regner ; Urup, Thomas ; Olsen, Lars Rønn ; Gillberg, Linn ; Broholm, Helle ; Grunnet, Kirsten ; Grønbæk, Kirsten ; Hamerlik, Petra ; Lassen, Ulrik ; Poulsen, Hans Skovgaard
in: Neuro-Oncology, vol: 19, issue: suppl_6, pages: vi170-vi170
Presented at:
22nd Annual Scientific Meeting and Education Day of the Society for Neuro-Oncology

Type: Conference abstract in journal (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: https://doi.org/10.1093/neuonc/nox168.692

 

TANTIGEN: a comprehensive database of tumor T cell antigens

Olsen, Lars Rønn ; Tongchusak, Songsak ; Lin, Honghuang ; Reinherz, Ellis L. ; Brusic, Vladimir ; Zhang, Guang Lan
in: Cancer Immunology Immunotherapy, vol: 66, pages: 731-735

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: https://doi.org/10.1007/s00262-017-1978-y

  PDF

Transcriptional changes induced by bevacizumab combination therapy in responding and non-responding recurrent glioblastoma patients

Urup, Thomas ; Staunstrup, Line Maersk ; Michaelsen, Signe Regner ; Vitting-Seerup, Kristoffer ; Bennedbaek, Marc ; Toft, Anders ; Olsen, Lars Rønn ; Jønson, Lars ; Issazadeh-Navikas, Shohreh ; Broholm, Helle ; Hamerlik, Petra ; Poulsen, Hans Skovgaard ; Lassen, Ulrik
in: B M C Cancer, vol: 17

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: https://doi.org/10.1186/s12885-017-3251-3