Ramneek Gupta

Ramneek Gupta

Lektor

DTU BIOINFORMATIK
Institut for Bio- og Sundhedsinformatik

Disease Intelligence and Molecular Evolution
DTU Bioinformatics Employees

Danmarks Tekniske Universitet

Kemitorvet

Bygning 208, rum 021

2800 Kgs. Lyngby

Tlf.
Tlf.
Fax 45 93 15 85
E-mail ramneek@cbs.dtu.dk
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Publikationer
Projekter
DTU nyheder
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2017
 

Transcriptome analysis of root-knot nematode (Meloidogyne incognita)-infected tomato (Solanum lycopersicum) roots reveals complex gene expression profiles and metabolic networks of both host and nematode during susceptible and resistance responses

Shukla, Neha ; Yadav, Rachita ; Kaur, Pritam ; Rasmussen, Simon ; Goel, Shailendra ; Agarwal, Manu ; Jagannath, Arun ; Gupta, Ramneek ; Kumar, Amar
in journal: Molecular Plant Pathology (ISSN: 1464-6722) (DOI: http://dx.doi.org/10.1111/mpp.12547), 2017

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    År: 2017     |    DOI: http://dx.doi.org/10.1111/mpp.12547

 

Obesity is associated with depot-specific alterations in adipocyte DNA methylation and gene expression

Sonne, Si Brask ; Yadav, Rachita ; Yin, Guangliang ; Dalgaard, Marlene Danner ; Myrmel, Lene Secher ; Gupta, Ramneek ; Wang, Jun ; Madsen, Lise ; Kajimura, Shingo ; Kristiansen, Karsten
in journal: Adipocyte (Philadelphia) (ISSN: 2162-3945) (DOI: http://dx.doi.org/10.1080/21623945.2017.1320002), 2017

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    År: 2017     |    DOI: http://dx.doi.org/10.1080/21623945.2017.1320002

2016
  PDF

Colonic transit time relates to bacterial metabolism and mucosal turnover in the human gut

Roager, Henrik Munch ; Hansen, Lea Benedicte Skov ; Bahl, Martin Iain ; Frandsen, Henrik Lauritz ; Carvalho, Vera ; Gøbel, Rikke J. ; Dalgaard, Marlene Danner ; Sparholt, Morten ; Vestergaard, Henrik ; Hansen, Torben ; Sicheritz-Ponten, Thomas ; Nielsen, Henrik Bjørn ; Pedersen, Oluf ; Lauritzen, Lotte ; Kristensen, Mette ; Gupta, Ramneek ; Licht, Tine Rask
Presented at:
10th Joint Symposium INRA-Rowett 2016: Gut Microbiology, 2016, Clermont-Ferrand

Type: Conference abstract for conference (Peer reviewed)

Status: Published     |    År: 2016

  PDF

The stepwise evolution of the exome during acquisition of docetaxel resistance in breast cancer cells

Hansen, Stine Ninel ; Ehlers, Natasja Spring ; Zhu, Shida ; Thomsen, Mathilde Borg Houlberg ; Nielsen, Rikke Linnemann ; Liu, Dongbing ; Wang, Guangbiao ; Hou, Yong ; Zhang, Xiuqing ; Xu, Xun ; Bolund, Lars ; Yang, Huanming ; Wang, Jun ; Moreira, Jose ; Ditzel, Henrik J. ; Brünner, Nils ; Schrohl, Anne-Sofie ; Stenvang, Jan ; Gupta, Ramneek
in journal: BMC Genomics (ISSN: 1471-2164) (DOI: http://dx.doi.org/10.1186/s12864-016-2749-4), vol: 17, 2016

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.1186/s12864-016-2749-4

 

Colonic transit time is related to bacterial metabolism and mucosal turnover in the gut

Roager, Henrik Munch ; Hansen, Lea Benedicte Skov ; Bahl, Martin Iain ; Frandsen, Henrik Lauritz ; Carvalho, Vera ; Gøbel, Rikke J ; Dalgaard, Marlene Danner ; Plichta, Damian Rafal ; Sparholt, Morten H ; Vestergaard, Henrik ; Hansen, Torben ; Sicheritz-Pontén, Thomas ; Nielsen, Henrik Bjørn ; Pedersen, Oluf ; Lauritzen, Lotte ; Kristensen, Mette ; Gupta, Ramneek ; Licht, Tine Rask
in journal: Nature Microbiology (ISSN: 2058-5276) (DOI: http://dx.doi.org/10.1038/nmicrobiol.2016.93), vol: 1, issue: 9, 2016

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.1038/nmicrobiol.2016.93

  PDF

Integrative analysis of miRNA and gene expression reveals regulatory networks in tamoxifen-resistant breast cancer

Joshi, Tejal ; Elias, Daniel ; Stenvang, Jan ; Alves, Carla L. ; Teng, Fei ; Lyng, Maria B. ; Lykkesfeldt, Anne E. ; Brünner, Nils ; Wang, Jun ; Gupta, Ramneek ; Workman, Christopher ; Ditzel, Henrik J.
in journal: OncoTarget (ISSN: 1949-2553) (DOI: http://dx.doi.org/10.18632/oncotarget.11136), vol: 7, issue: 35, pages: 57239-57253, 2016

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.18632/oncotarget.11136

  PDF

Ranking factors involved in diabetes remission after bariatric surgery using machine-learning integrating clinical and genomic biomarkers

Pedersen, Helle Krogh ; Gudmundsdottir, Valborg ; Pedersen, Mette Krogh ; Brorsson, Caroline Anna ; Brunak, Søren ; Gupta, Ramneek
in journal: Genome Medicine (ISSN: 1756-994X) (DOI: http://dx.doi.org/10.1038/npjgenmed.2016.35), vol: 1, 2016

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.1038/npjgenmed.2016.35

 

Whole genome sequencing for childhood cancer in Denmark

Gupta, Ramneek
Presented at:
Sustain-ATV Conference 2016, 2016, Kgs. Lyngby

Type: Conference abstract for conference (Peer reviewed)

Status: Published     |    År: 2016

  PDF

The Nopho-European Study on Cerebellar Mutism Syndrome (CMS)

Wibroe, Morten ; Avula, Shivaram ; Cappelen, Johan ; Castor, Charlotte ; Clausen, Niels ; Devenney, Irene ; Fellows, Greg ; Grillner, Pernilla ; Gupta, Ramneek ; Gustavsson, Bengt ; Heyman, Mats ; Holm, Stefan ; Karppinen, Atte ; Kiudeliene, Rosita ; Klausen, Camilla ; Lahteenmaki, Paivi ; Lönnqvist, Tuula ; Lowis, Stephen ; Mallucci, Conor ; Mathiasen, Rene ; Mattson, Mattias ; Nilsson, Pelle ; Nordfors, Kristiina ; Nyman, Per ; Nysom, Karsten ; Persson, Karin ; Pesola, Jouni ; Pizer, Barry ; Rask, Olof ; Sabel, Magnus ; Schmiegelow, Kjeld ; Sehested, Astrid ; Tonning-Olsson, Ingrid ; Torsvik, Ingrid Kristin ; van Baarsen, Kirsten ; Walker, David ; Westerholm-Ormio, Mia ; Zetterqvist, Barbara ; Juhler, Marianne
in journal: Neuro-Oncology (ISSN: 1522-8517) (DOI: http://dx.doi.org/10.1093/neuonc/now066.5), vol: 18, pages: 17, 2016
Presented at:
17th International Symposium on Pediatric Neuro-Oncology (ISPNO), 2016, Liverpool

Type: Conference abstract in journal (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.1093/neuonc/now066.5

 

Quality of life (QoL) and neurotoxicity in germ-cell cancer survivors (GCCS)

Lauritsen, J. ; Bandak, Mikkel ; Mortensen, M. S. ; Kier, M. G. G. ; Agerbaek, M. ; Holm, N. V. ; Gupta, Ramneek ; Johansen, C.
in journal: Annals of Oncology (ISSN: 0923-7534) (DOI: http://dx.doi.org/10.1093/annonc/mdw373.06), vol: 27, issue: suppl_6, 2016
Presented at:
41st ESMO Congress (ESMO 2016), 2016, Copenhagen

Type: Conference abstract in journal (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.1093/annonc/mdw373.06