Søren Brunak

Søren Brunak

Professor

DTU BIOINFORMATIK
Institut for Bio- og Sundhedsinformatik

Integrative Systems Biology
DTU Bioinformatics Employees

Danmarks Tekniske Universitet

Kemitorvet

Bygning 208, rum 016

2800 Kgs. Lyngby

Tlf.
Tlf.
Fax 45 93 15 85
E-mail brunak@bioinformatics.dtu.dk
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Publikationer
Projekter
DTU nyheder
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2017
 

Combinatorial Drug Screening Identifies Ewing Sarcoma-specific Sensitivities

Radic-Sarikas, Branka ; Tsafou, Kalliopi P ; Emdal, Kristina B. ; Papamarkou, Theodore ; Huber, Kilian V. M. ; Mutz, Cornelia ; Toretsky, Jeffrey A ; Bennett, Keiryn L. ; Olsen, Jesper V. ; Brunak, Søren ; Kovar, Heinrich ; Superti-Furga, Giulio
in journal: Molecular Cancer Therapeutics (ISSN: 1535-7163) (DOI: http://dx.doi.org/10.1158/1535-7163.MCT-16-0235), vol: 16, issue: 1, pages: 88-101, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.1158/1535-7163.MCT-16-0235

 

Early differences in islets from prediabetic NOD mice: combined microarray and proteomic analysis

Crèvecoeur, Inne ; Gudmundsdottir, Valborg ; Vig, Saurabh ; Marques Câmara Sodré, Fernanda ; D'Hertog, Wannes ; Fierro, Ana Carolina ; Van Lommel, Leentje ; Gysemans, Conny ; Marchal, Kathleen ; Waelkens, Etienne ; Schuit, Frans ; Brunak, Søren ; Overbergh, Lut ; Mathieu, Chantal
in journal: Diabetologia (ISSN: 0012-186X) (DOI: http://dx.doi.org/10.1007/s00125-016-4191-1), 2017

Type: Journal article (Peer reviewed)

Status: E-pub ahead of print     |    År: 2017     |    DOI: http://dx.doi.org/10.1007/s00125-016-4191-1

  PDF

Cutavirus in Cutaneous Malignant Melanoma

Mollerup, Sarah ; Fridholm, Helena ; Vinner, Lasse ; Kjartansdóttir, Kristín Rós ; Friis-Nielsen, Jens ; Asplund, Maria ; Herrera, Jose Romero ; Steiniche, Torben ; Mourier, Tobias ; Brunak, Søren ; Willerslev, Eske ; Gonzalez-Izarzugaza, Jose Maria ; Hansen, Anders Johannes ; Nielsen, Lars Peter
in journal: Emerging Infectious Diseases (ISSN: 1080-6040) (DOI: http://dx.doi.org/10.3201/eid2302.161564), vol: 23, issue: 2, pages: 363-365, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.3201/eid2302.161564

 

Nomenclature for alleles of the human carboxylesterase 1 gene

Rasmussen, Henrik B. ; Madsen, Majbritt B. ; Bjerre, Ditte ; Ferrero, Laura ; Linnet, Kristian ; Thomsen, Ragnar ; Jorgens, Gesche ; Dalhoff, Kim ; Stage, Claus ; Stefansson, Hreinn ; Hankemeier, Thomas ; Kaddurah-Daouk, Rima ; Brunak, Søren ; Taboureau, Olivier ; Nzabonimpa, Grace Shema ; Jeppesen, Pia ; Kaalund-Jørgensen, Kristine ; Kristensen, Karl Emil ; Pagsberg, Anne Katrine ; Plessen, Kerstin Jessica ; Hansen, Poul Erik ; Werge, Thomas ; Dyrborg, J. ; Lauritzen, Maj Britt ; Hughes, Tim
in journal: Pharmacogenetics and Genomics (ISSN: 1744-6872) (DOI: http://dx.doi.org/10.1097/FPC.0000000000000255), vol: 27, issue: 2, pages: 78-80, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.1097/FPC.0000000000000255

  PDF

Chromosome-wise Protein Interaction Patterns and Their Impact on Functional Implications of Large-Scale Genomic Aberrations

Kirk, Isa Kristina ; Weinhold, Nils ; Belling, Kirstine González-Izarzugaza ; Skakkebæk, Niels Erik ; Jensen, Thomas Skøt ; Leffers, Henrik ; Juul, Anders ; Brunak, Søren
in journal: Cell Systems (ISSN: 2405-4712) (DOI: http://dx.doi.org/10.1016/j.cels.2017.01.001), vol: 4, issue: 3, pages: 357-364, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.1016/j.cels.2017.01.001

  PDF

Mapping of 79 loci for 83 plasma protein biomarkers in cardiovascular disease

Folkersen, Lasse Westergaard ; Fauman, Eric ; Sabater-Lleal, Maria ; Strawbridge, Rona J. ; Frånberg, Mattias ; Sennblad, Bengt ; Baldassarre, Damiano ; Veglia, Fabrizio ; Humphries, Steve E ; Rauramaa, Rainer ; de Faire, Ulf ; Smit, Andries J ; Giral, Philippe ; Kurl, Sudhir ; Mannarino, Elmo ; Enroth, Stefan ; Johansson, Åsa ; Enroth, Sofia Bosdotter ; Gustafsson, Stefan ; Lind, Lars ; Lindgren, Cecilia M. ; Morris, Andrew P ; Giedraitis, Vilmantas ; Silveira, Angela ; Franco-Cereceda, Anders ; Tremoli, Elena ; Gyllensten, Ulf ; Ingelsson, Erik ; Brunak, Søren ; Eriksson, Per ; Ziemek, Daniel ; Hamsten, Anders ; Mälarstig, Anders
in journal: P L o S Genetics (ISSN: 1553-7390) (DOI: http://dx.doi.org/10.1371/journal.pgen.1006706), 2017

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    År: 2017     |    DOI: http://dx.doi.org/10.1371/journal.pgen.1006706

  PDF

Pancreatic Islet Protein Complexes and Their Dysregulation in Type 2 Diabetes

Pedersen, Helle Krogh ; Gudmundsdottir, Valborg ; Brunak, Søren
in journal: Frontiers in Genetics (ISSN: 1664-8021) (DOI: http://dx.doi.org/10.3389/fgene.2017.00043), vol: 8, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.3389/fgene.2017.00043

 

Comparison of global gene expression profiles of microdissected human foetal Leydig cells with their normal and hyperplastic adult equivalents

Lottrup, Grete ; Belling, Kirstine González-Izarzugaza ; Leffers, Henrik ; Nielsen, John E. ; Dalgaard, Marlene Danner ; Juul, Anders ; Skakkebæk, Niels E. ; Brunak, Søren ; Rajpert-De Meyts, Ewa
in journal: Molecular Human Reproduction (ISSN: 1360-9947) (DOI: http://dx.doi.org/10.1093/molehr/gax012), vol: 23, issue: 5, pages: 339-354, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.1093/molehr/gax012

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Lapatinib potentiates cytotoxicity of YM155 in neuroblastoma via inhibition of the ABCB1 efflux transporter

Radic-Sarikas, Branka ; Halasz, Melinda ; Huber, Kilian V. M. ; Winter, Georg E. ; Tsafou, Kalliopi P. ; Papamarkou, Theodore ; Brunak, Søren ; Kolch, Walter ; Superti-Furga, Giulio
in journal: Scientific Reports (ISSN: 2045-2322) (DOI: http://dx.doi.org/10.1038/s41598-017-03129-6), vol: 7, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.1038/s41598-017-03129-6

 

Protein features as determinants of wild-type glycoside hydrolase thermostability

Geertz-Hansen, Henrik Marcus ; Kiemer, Lars ; Nielsen, Morten ; Stanchev, Kiril ; Blom, Nikolaj ; Brunak, Søren ; Petersen, Thomas Nordahl
in journal: Proteins (ISSN: 0887-3585) (DOI: http://dx.doi.org/10.1002/prot.25357), 2017

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    År: 2017     |    DOI: http://dx.doi.org/10.1002/prot.25357