Anders Gorm Pedersen

Anders Gorm Pedersen

Professor

DTU BIOINFORMATIK
Institut for Bio- og Sundhedsinformatik

Disease Intelligence and Molecular Evolution
DTU Bioinformatics Employees

Danmarks Tekniske Universitet

Kemitorvet

Bygning 208, rum 017

2800 Kgs. Lyngby

Tlf.
Tlf.
Fax 45 93 15 85
E-mail gorm@cbs.dtu.dk
Hjemmeside

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Publikationer
Projekter
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DTU nyheder
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2017
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Bacterial whole genome-based phylogeny: construction of a new benchmarking dataset and assessment of some existing methods

Ahrenfeldt, Johanne ; Skaarup, Carina ; Hasman, Henrik ; Pedersen, Anders Gorm ; Aarestrup, Frank Møller ; Lund, Ole
in journal: BMC Genomics (ISSN: 1471-2164) (DOI: http://dx.doi.org/10.1186/s12864-016-3407-6), vol: 18, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.1186/s12864-016-3407-6

 

Breadth of T cell responses after immunization with adenovirus vectors encoding ancestral antigens or polyvalent papillomavirus antigens

Ragonnaud, Emeline ; Pedersen, Anders Gorm ; Holst, Peter Johannes
in journal: Scandinavian Journal of Immunology (ISSN: 0300-9475) (DOI: http://dx.doi.org/10.1111/sji.12522), 2017

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    År: 2017     |    DOI: http://dx.doi.org/10.1111/sji.12522

2016
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A fast and robust method for whole genome sequencing of the Aleutian Mink Disease Virus (AMDV) genome

Hagberg, Emma Elisabeth ; Krarup, Anders ; Fahnøe, Ulrik ; Larsen, Lars Erik ; Dam-Tuxen, Rebekka ; Pedersen, Anders Gorm
in journal: Journal of Virological Methods (ISSN: 0166-0934) (DOI: http://dx.doi.org/10.1016/j.jviromet.2016.03.010), vol: 234, pages: 43-51, 2016

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.1016/j.jviromet.2016.03.010

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Using expected sequence features to improve basecalling accuracy of amplicon pyrosequencing data

Rask, Thomas Salhøj ; Petersen, Bent ; Chen, Donald S. ; Day, Karen P. ; Pedersen, Anders Gorm
in journal: B M C Bioinformatics (ISSN: 1471-2105) (DOI: http://dx.doi.org/10.1186/s12859-016-1032-7), vol: 17, issue: 1, 2016

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.1186/s12859-016-1032-7

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Outbreaks of Aleutian mink disease in farmed mink (Neovison vison) in Denmark: molecular characterization by partial NS1 gene sequencing

Hjulsager, Charlotte Kristiane ; Ryt-Hansen, Pia ; Hagberg, E. E. ; Chriél, Mariann ; Struve, T. ; Krarup, A. ; Pedersen, Anders Gorm ; Larsen, Lars Erik
part of: Proceedings of the XIth International Scientific Congress in Fur Animal Production, pages: 85-87, 2016, Libris, Helsinki, Finland
Presented at:
11th International Scientific Congress in Fur Animal Production, 2016, Helsinki

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    År: 2016

 

Fish Oil-Derived Fatty Acids in Pregnancy and Wheeze and Asthma in Offspring

Bisgaard, Hans ; Stokholm, Jakob ; Chawes, Bo L. ; Vissing, Nadja H. ; Bjarnadóttir, Elin ; Schoos, Ann-Marie M. ; Wolsk, Helene M ; Vinding, Rebecca K. ; Thorsteinsdóttir, Sunna ; Følsgaard, Nilofar V. ; Fink, Nadia R. ; Thorsen, Jonathan ; Pedersen, Anders Gorm ; Waage, Johannes ; Rasmussen, Morten A. ; Stark, Ken D. ; Olsen, Sjurdur F. ; Bønnelykke, Klaus
in journal: New England Journal of Medicine (ISSN: 0028-4793) (DOI: http://dx.doi.org/10.1056/NEJMoa1503734), vol: 375, issue: 26, pages: 2530-2539, 2016

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.1056/NEJMoa1503734

2015
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Creation of Functional Viruses from Non-Functional cDNA Clones Obtained from an RNA Virus Population by the Use of Ancestral Reconstruction

Fahnøe, Ulrik ; Pedersen, Anders Gorm ; Dräger, Carolin ; Orton, Richard J ; Blome, Sandra ; Höper, Dirk ; Beer, Martin ; Rasmussen, Thomas Bruun
in journal: P L o S One (ISSN: 1932-6203) (DOI: http://dx.doi.org/10.1371/journal.pone.0140912), vol: 10, issue: 10, 2015

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2015     |    DOI: http://dx.doi.org/10.1371/journal.pone.0140912

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Early Divergent Strains of Yersinia pestis in Eurasia 5,000 Years Ago

Rasmussen, Simon ; Allentoft, Morten Erik ; Nielsen, Kasper ; Orlando, Ludovic ; Sikora, Martin ; Sjögren, Karl-Göran ; Pedersen, Anders Gorm ; Schubert, Mikkel ; Van Dam, Alex ; Kapel, Christian Moliin Outzen ; Nielsen, Henrik Bjørn ; Brunak, Søren ; Avetisyan, Pavel ; Epimakhov, Andrey ; Khalyapin, Mikhail Viktorovich ; Gnuni, Artak ; Kriiska, Aivar ; Lasak, Irena ; Metspalu, Mait ; Moiseyev, Vyacheslav ; Gromov, Andrei ; Pokutta, Dalia ; Saag, Lehti ; Varul, Liivi ; Yepiskoposyan, Levon ; Sicheritz-Pontén, Thomas ; Foley, Robert A ; Lahr, Marta Mirazón ; Nielsen, Rasmus ; Kristiansen, Kristian ; Willerslev, Eske
in journal: Cell (ISSN: 0092-8674) (DOI: http://dx.doi.org/10.1016/j.cell.2015.10.009), vol: 163, issue: 3, pages: 571-582, 2015

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2015     |    DOI: http://dx.doi.org/10.1016/j.cell.2015.10.009

2014
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DNA secondary structures are associated with recombination in major Plasmodium falciparum variable surface antigen gene families

Sander, Adam F. ; Lavstsen, Thomas ; Rask, Thomas Salhøj ; Lisby, Michael ; Salanti, Ali ; Fordyce, Sarah L. ; Jespersen, Jakob S. ; Carter, Richard ; Deitsch, Kirk W. ; Theander, Thor G. ; Pedersen, Anders Gorm ; Arnot, David E.
in journal: Nucleic Acids Research (ISSN: 0305-1048) (DOI: http://dx.doi.org/10.1093/nar/gkt1174), vol: 42, issue: 4, pages: 2270-2281, 2014

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2014     |    DOI: http://dx.doi.org/10.1093/nar/gkt1174

 

Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes

Nielsen, Henrik Bjørn ; Almeida, Mathieu ; Juncker, Agnieszka ; Rasmussen, Simon ; Li, Junhua ; Sunagawa, Shinichi ; Plichta, Damian Rafal ; Gautier, Laurent ; Pedersen, Anders Gorm ; Emmanuelle, Le Chatelier ; Pelletier, Eric ; Bonde, Ida ; Nielsen, Trine ; Manichanh, Chaysavanh ; Arumugam, Manimozhiyan ; Batto, Jean-Michel ; dos Santos, Marcelo Bertalan Quintanilha ; Blom, Nikolaj ; Borruel, Natalia ; Burgdorf, Kristoffer S. ; Boumezbeur, Fouad ; Casellas, Francesc ; Doré, Joël ; Dworzynski, Piotr ; Guarner, Francisco ; Hansen, Torben ; Hildebrand, Falk ; Kaas, Rolf Sommer ; Kennedy, Sean ; Kristiansen, Karsten ; Kultima, Jens Roat ; Léonard, Pierre ; Levenez, Florence ; Lund, Ole ; Moumen, Bouziane ; Denis, Le Paslier ; Pons, Nicolas ; Pedersen, Oluf ; Prifti, Edi ; Qin, Junjie ; Raes, Jeroen ; Sørensen, Søren ; Tap, Julien ; Tims, Sebastian ; Ussery, David ; Yamada, Takuji ; Renault, Pierre ; Sicheritz-Pontén, Thomas ; Bork, Peer ; Wang, Jun ; Brunak, Søren ; Ehrlich, S. Dusko
in journal: Nature Biotechnology (ISSN: 1087-0156) (DOI: http://dx.doi.org/10.1038/nbt.2939), vol: 32, issue: 8, pages: 822-828, 2014

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2014     |    DOI: http://dx.doi.org/10.1038/nbt.2939