Vanessa Isabell Jurtz

Vanessa Isabell Jurtz

Ph.d.-studerende

DTU BIOINFORMATIK
Institut for Bio- og Sundhedsinformatik

Immunoinformatics and Machine Learning
DTU Bioinformatics Employees

Danmarks Tekniske Universitet

Kemitorvet

Bygning 208, rum 063

2800 Kgs. Lyngby

Tlf.
Tlf.
Mobil
Fax 45 93 15 85
E-mail vanessa@bioinformatics.dtu.dk
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Publikationer
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2017
 

Machine Learning Reveals a Non-Canonical Mode of Peptide Binding to MHC class II Molecules

Andreatta, Massimo ; Jurtz, Vanessa Isabell ; Kaever, Thomas ; Sette, Alessandro ; Peters, Bjoern ; Nielsen, Morten
in journal: Immunology (ISSN: 0019-2805) (DOI: http://dx.doi.org/10.1111/imm.12763), pages: 255-264, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.1111/imm.12763

 

The CGE Tool Box

Larsen, Mette Voldby ; Joensen, Katrine Grimstrup ; Zankari, Ea ; Ahrenfeldt, Johanne ; Lukjancenko, Oksana ; Kaas, Rolf Sommer ; Roer, Louise ; Leekitcharoenphon, Pimlapas ; Saputra, Dhany ; Cosentino, S. ; Thomsen, Martin Christen Frølund ; Bellod Cisneros, Jose Luis ; Jurtz, Vanessa Isabell ; Rasmussen, Simon ; Petersen, Thomas Nordahl ; Hasman, Henrik ; Sicheritz-Pontén, Thomas ; Aarestrup, Frank Møller ; Lund, Ole
part of: Applied Genomics of Foodborne Pathogens, pages: 65-90, 2017, Springer, Switzerland

Type: Book chapter (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.1007/978-3-319-43751-4_5

 

An introduction to Deep learning on biological sequence data - Examples and solutions

Jurtz, Vanessa Isabell ; Johansen, Alexander Rosenberg ; Nielsen, Morten ; Almagro Armenteros, Jose Juan ; Nielsen, Henrik ; Kaae Sønderby, Casper ; Winther, Ole ; Kaae Sønderby, Søren
in journal: Bioinformatics (ISSN: 1367-4803) (DOI: http://dx.doi.org/10.1093/bioinformatics/btx531), 2017

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    År: 2017     |    DOI: http://dx.doi.org/10.1093/bioinformatics/btx531

 

NetMHCpan-4.0: Improved Peptide-MHC Class I Interaction Predictions Integrating Eluted Ligand and Peptide Binding Affinity Data

Jurtz, Vanessa Isabell ; Paul, Sinu ; Andreatta, Massimo ; Marcatili, Paolo ; Peters, Bjoern ; Nielsen, Morten
in journal: Journal of Immunology (ISSN: 0022-1767) (DOI: http://dx.doi.org/10.4049/jimmunol.1700893), vol: 199, issue: 8, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.4049/jimmunol.1700893

2016
  PDF

A Bacterial Analysis Platform: An Integrated System for Analysing Bacterial Whole Genome Sequencing Data for Clinical Diagnostics and Surveillance

Thomsen, Martin Christen Frølund ; Ahrenfeldt, Johanne ; Bellod Cisneros, Jose Luis ; Jurtz, Vanessa Isabell ; Larsen, Mette Voldby ; Hasman, Henrik ; Aarestrup, Frank Møller ; Lund, Ole
in journal: P L o S One (ISSN: 1932-6203) (DOI: http://dx.doi.org/10.1371/journal.pone.0157718), vol: 11, issue: 6, 2016

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.1371/journal.pone.0157718

  PDF

HostPhinder: A Phage Host Prediction Tool

Villarroel, Julia ; Kleinheinz, Kortine Annina ; Jurtz, Vanessa Isabell ; Zschach, Henrike ; Lund, Ole ; Nielsen, Morten ; Larsen, Mette Voldby
in journal: Viruses (ISSN: 1999-4915) (DOI: http://dx.doi.org/10.3390/v8050116), vol: 8, issue: 5, 2016

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.3390/v8050116

  PDF

MetaPhinder-Identifying Bacteriophage Sequences in Metagenomic Data Sets

Jurtz, Vanessa Isabell ; Villarroel, Julia ; Lund, Ole ; Larsen, Mette Voldby ; Nielsen, Morten
in journal: P L o S One (ISSN: 1932-6203) (DOI: http://dx.doi.org/10.1371/journal.pone.0163111), vol: 11, issue: 9, 2016

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.1371/journal.pone.0163111