Jose Maria Gonzalez-Izarzugaza

Jose Maria Gonzalez-Izarzugaza

Lektor

DTU BIOINFORMATIK
Institut for Bio- og Sundhedsinformatik

Integrative Systems Biology
DTU Bioinformatics Employees

Danmarks Tekniske Universitet

Kemitorvet

Bygning 208, rum 017

2800 Kgs. Lyngby

Tlf.
Tlf.
Fax 45 93 15 85
E-mail txema@cbs.dtu.dk
ORCID 0000-0003-1754-5122
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Publikationer
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2017
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Cutavirus in Cutaneous Malignant Melanoma

Mollerup, Sarah ; Fridholm, Helena ; Vinner, Lasse ; Kjartansdóttir, Kristín Rós ; Friis-Nielsen, Jens ; Asplund, Maria ; Herrera, Jose Romero ; Steiniche, Torben ; Mourier, Tobias ; Brunak, Søren ; Willerslev, Eske ; Gonzalez-Izarzugaza, Jose Maria ; Hansen, Anders Johannes ; Nielsen, Lars Peter
in journal: Emerging Infectious Diseases (ISSN: 1080-6040) (DOI: http://dx.doi.org/10.3201/eid2302.161564), vol: 23, issue: 2, pages: 363-365, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.3201/eid2302.161564

2016
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wKinMut-2: Identification and Interpretation of Pathogenic Variants in Human Protein Kinases

Vazquez, Miguel ; Pons, Tirso ; Brunak, Søren ; Valencia, Alfonso ; Gonzalez-Izarzugaza, Jose Maria
in journal: Human Mutation (ISSN: 1059-7794) (DOI: http://dx.doi.org/10.1002/humu.22914), vol: 37, issue: 1, pages: 36-42, 2016

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.1002/humu.22914

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Propionibacterium acnes: disease-causing agent or common contaminant? Detection in diverse patient samples by next generation sequencing

Mollerup, Sarah ; Friis-Nielsen, Jens ; Vinner, Lasse ; Richter, Stine Raith ; Fridholm, Helena ; Herrera, Jose Romero ; Lund, Ole ; Brunak, Søren ; Gonzalez-Izarzugaza, Jose Maria ; Mourier, Tobias ; Nielsen, Lars Peter ; Hansen, Anders Johannes
in journal: Journal of Clinical Microbiology (ISSN: 0095-1137) (DOI: http://dx.doi.org/10.1128/jcm.02723-15), vol: 54, issue: 4, pages: 980-987, 2016

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.1128/jcm.02723-15

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Identification of Known and Novel Recurrent Viral Sequences in Data from Multiple Patients and Multiple Cancers

Friis-Nielsen, Jens ; Kjartansdóttir, Kristín Rós ; Mollerup, Sarah ; Asplund, Maria ; Mourier, Tobias ; Holm Jensen, Randi ; Arn Hansen, Thomas ; Rey-Iglesia, Alba ; Vinner, Lasse ; Fridholm, Helena ; Nielsen, Lars Peter ; Willerslev, Eske ; Sicheritz-Pontén, Thomas ; Lund, Ole ; Hansen, Anders Johannes ; Gonzalez-Izarzugaza, Jose Maria ; Brunak, Søren
in journal: Viruses (ISSN: 1999-4915) (DOI: http://dx.doi.org/10.3390/v8020053), vol: 8, issue: 53, 2016

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.3390/v8020053

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How compelling are the data for Epstein-Barr virus being a trigger for systemic lupus and other autoimmune diseases?

Draborg, Anette ; Gonzalez-Izarzugaza, Jose Maria ; Houen, Gunnar
in journal: Current Opinion in Rheumatology (ISSN: 1040-8711) (DOI: http://dx.doi.org/10.1097/BOR.0000000000000289), vol: 28, issue: 4, pages: 398-404, 2016

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.1097/BOR.0000000000000289

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Species-independent identification of known and novel recurrent genomic entities in multiple cancer patients

Friis-Nielsen, Jens ; Gonzalez-Izarzugaza, Jose Maria ; Brunak, Søren
in journal: Human Genomics (Online) (ISSN: 1479-7364) (DOI: http://dx.doi.org/10.1186/s40246-016-0063-5), vol: 10, issue: Suppl. 1, 2016
Presented at:
Human Genome Meeting 2016, 2016, Houston, TX

Type: Conference abstract in journal (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.1186/s40246-016-0063-5

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KinMutRF: a random forest classifier of sequence variants in the human protein kinase superfamily

Pons, Tirso ; Vazquez, Miguel ; Matey-Hernandez, María Luisa ; Brunak, Søren ; Valencia, Alfonso ; Gonzalez-Izarzugaza, Jose Maria
in journal: BMC Genomics (ISSN: 1471-2164) (DOI: http://dx.doi.org/10.1186/s12864-016-2723-1), vol: 17, issue: Suppl. 2, 2016

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.1186/s12864-016-2723-1

2015
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Novel variation and de novo mutation rates in population-wide de novo assembled Danish trios

Besenbacher, Søren ; Liu, Siyang ; Gonzalez-Izarzugaza, Jose Maria ; Grove, Jakob ; Belling, Kirstine González-Izarzugaza ; Bork-Jensen, Jette ; Huang, Shujia ; Dam-Als, Thomas ; Li, Shengting ; Yadav, Rachita ; Rubio García, Arcadio ; Lescai, Francesco ; Demontis, Ditte ; Rao, Junhua ; Ye, Weijian ; Mailund, Thomas ; Friborg, Rune M. ; Pedersen, Christian N. S. ; Xu, Ruiqi ; Sun, Jihua ; Liu, Hao ; Wang, Ou ; Cheng, Xiaofang ; Flores Santa Cruz, David ; Rydza, Emil Karol ; Rapacki, Kristoffer ; Sørensen, John Damm ; Chmura, Piotr Jaroslaw ; Westergaard, David ; Dworzynski, Piotr ; Sørensen, Thorkild I. A. ; Lund, Ole ; Hansen, Torben ; Xu, Xun ; Li, Ning ; Bolund, Lars ; Pedersen, Oluf ; Eiberg, Hans ; Krogh, Anders ; Børglum, Anders D. ; Brunak, Søren ; Kristiansen, Karsten ; Schierup, Mikkel H ; Jun, Wang ; Gupta, Ramneek ; Villesen, Palle ; Rasmussen, Simon
in journal: Nature Communications (ISSN: 2041-1723) (DOI: http://dx.doi.org/10.1038/ncomms6969), vol: 6, 2015

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2015     |    DOI: http://dx.doi.org/10.1038/ncomms6969

 

Traces of ATCV-1 associated with laboratory component contamination

Kjartansdóttir, Kristín Rós ; Friis-Nielsen, Jens ; Asplund, Maria ; Mollerup, Sarah ; Mourier, Tobias ; Holm Jensen, Randi ; Arn Hansen, Thomas ; Rey-Iglesia, Alba ; Raith Richter, Stine ; Alquezar-Planas, David E. ; Olsen, Pernille V. S. ; Vinner, Lasse ; Fridholm, Helena ; Sicheritz-Pontén, Thomas ; Nielsen, Lars Peter ; Brunak, Søren ; Willerslev, Eske ; Gonzalez-Izarzugaza, Jose Maria ; Hansen, Anders Johannes
in journal: National Academy of Sciences. Proceedings (ISSN: 0027-8424) (DOI: http://dx.doi.org/10.1073/pnas.1423756112), vol: 112, issue: 9, pages: E925–E926, 2015

Type: Letter (Peer reviewed)

Status: Published     |    År: 2015     |    DOI: http://dx.doi.org/10.1073/pnas.1423756112

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Investigation of Human Cancers for Retrovirus by Low-Stringency Target Enrichment and High-Throughput Sequencing

Vinner, Lasse ; Mourier, Tobias ; Friis-Nielsen, Jens ; Gniadecki, Robert ; Dybkaer, Karen ; Rosenberg, Jacob ; Levin Langhof, Jill ; Flores Santa Cruz, David ; Fonager, Jannik ; Gonzalez-Izarzugaza, Jose Maria ; Gupta, Ramneek ; Sicheritz-Pontén, Thomas ; Brunak, Søren ; Willerslev, Eske ; Nielsen, Lars Peter ; Hansen, Anders Johannes
in journal: Scientific Reports (ISSN: 2045-2322) (DOI: http://dx.doi.org/10.1038/srep13201), vol: 5, 2015

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2015     |    DOI: http://dx.doi.org/10.1038/srep13201