DTU Sundhedsteknologi
DTU Bioinformatik
Lars Rønn Olsen

Lars Rønn Olsen

Gruppeleder, Lektor

Institut for Sundhedsteknologi

Danmarks Tekniske Universitet

Kemitorvet

Bygning 208, rum 015

2800 Kgs. Lyngby

Tlf.
Tlf.
Fax 45 93 15 85
E-mail lronn@dtu.dk
Hjemmeside

Få tilsendt vCard på e-mail.

Publikationer
Projekter
Kurser
DTU nyheder
Loading

Publikationer rss feed

2019
  PDF

BioReader: a text mining tool for performing classification of biomedical literature

Simon, Christian ; Davidsen, Kristian ; Hansen, Christina ; Seymour, Emily ; Barnkob, Mike Bogetofte ; Olsen, Lars Rønn
in: BMC Bioinformatics, vol: 19, issue: S13, pages: 165-170

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1186/s12859-019-2607-x

 

Getting the Most from Your High-Dimensional Cytometry Data

Olsen, Lars R. ; Pedersen, Christina B. ; Leipold, Michael D. ; Maecker, Holden T.
in: Immunity, vol: 50, issue: 3, pages: 535-536

Type: Letter (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1016/j.immuni.2019.02.015

 

Publisher Correction: Clonal analysis of Salmonella-specific effector T cells reveals serovar-specific and cross-reactive T cell responses

Napolitani, Giorgio ; Teng, Karen Wei Weng ; Gibani, Malick M. ; Kurupati, Prathiba ; Rei, Margarida ; Aulicino, Anna ; Preciado-Llanes, Lorena ; Wong, Michael Thomas ; Becht, Etienne ; Howson, Lauren ; de Haas, Paola ; Salio, Mariolina ; Blohmke, Christoph J. ; Olsen, Lars Rønn ; Pinto, David Miguel Susano ; Scifo, Laura ; Jones, Claire ; Dobinson, Hazel ; Campbell, Danielle ; Juel, Helene B. ; Thomaides-Brears, Helena ; Pickard, Derek ; Bumann, Dirk ; Baker, Stephen ; Dougan, Gordon ; Simmons, Alison ; Gordon, Melita A. ; Newell, Evan William ; Pollard, Andrew J. ; Cerundolo, Vincenzo
in: Nature Immunology, vol: 20

Type: Journal article

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1038/s41590-019-0357-6

 

RNase H-dependent PCR-enabled T-cell receptor sequencing for highly specific and efficient targeted sequencing of T-cell receptor mRNA for single-cell and repertoire analysis

Li, Shuqiang ; Sun, Jing ; Allesøe, Rosa Lundbye ; Datta, Krishnalekha ; Bao, Yun ; Oliveira, Giacomo ; Forman, Juliet ; Jin, Roger ; Olsen, Lars Rønn ; Keskin, Derin B. ; Shukla, Sachet A. ; Wu, Catherine J. ; Livak, Kenneth J.
in: Nature Protocols, vol: 14, pages: 2571-2594

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1038/s41596-019-0195-x

 

The anatomy of single cell mass cytometry data

Olsen, Lars Rønn ; Leipold, Michael D. ; Pedersen, Christina B. ; Maecker, Holden Terry
in: Cytometry. Part A, vol: 95, issue: 2, pages: 156-172

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1002/cyto.a.23621

2018
 

Clonal analysis of Salmonella-specific effector T cells reveals serovar-specific and cross-reactive T cell responses

Napolitani, Giorgio ; Kurupati, Prathiba ; Teng, Karen Wei Weng ; Gibani, Malick M. ; Rei, Margarida ; Aulicino, Anna ; Preciado-Llanes, Lorena ; Wong, Michael Thomas ; Becht, Etienne ; Howson, Lauren ; de Haas, Paola ; Salio, Mariolina ; Blohmke, Christoph J. ; Olsen, Lars Rønn ; Pinto, David Miguel Susano ; Scifo, Laura ; Jones, Claire ; Dobinson, Hazel ; Campbell, Danielle ; Juel, Helene B. ; Thomaides-Brears, Helena ; Pickard, Derek ; Bumann, Dirk ; Baker, Stephen ; Dougan, Gordon ; Simmons, Alison ; Gordon, Melita A. ; Newell, Evan William ; Pollard, Andrew J. ; Cerundolo, Vincenzo
in: Nature Immunology, vol: 19, issue: 7, pages: 1-13

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1038/s41590-018-0133-z

  PDF

Comparison of CyTOF assays across sites: Results of a six-center pilot study

Leipold, Michael D. ; Obermoser, Gerlinde ; Fenwick, Craig ; Kleinstuber, Katja ; Rashidi, Narges ; McNevin, John P. ; Nau, Allison N. ; Wagar, Lisa E. ; Rozot, Virginie ; Davis, Mark M. ; DeRosa, Stephen ; Pantaleo, Giuseppe ; Scriba, Thomas J. ; Walker, Bruce D. ; Olsen, Lars R. ; Maecker, Holden T.
in: Journal of Immunological Methods, vol: 453, pages: 37-43

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1016/j.jim.2017.11.008

 

Molecular profiling of short-term and long-term surviving patients identifies CD34 mRNA level as prognostic for glioblastoma survival

Michaelsen, Signe Regner ; Urup, Thomas ; Olsen, Lars Rønn ; Broholm, Helle ; Lassen, Ulrik ; Poulsen, Hans Skovgaard
in: Journal of Neuro-Oncology, vol: 137, issue: 3, pages: 533-542

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1007/s11060-017-2739-7

 

Neoantigen vaccine generates intratumoral T cell responses in phase Ib glioblastoma trial

Keskin, Derin B. ; Anandappa, Annabelle J. ; Sun, Jing ; Tirosh, Itay ; Mathewson, Nathan D. ; Li, Shuqiang ; Oliveira, Giacomo ; Giobbie-Hurder, Anita ; Felt, Kristen ; Gjini, Evisa ; Shukla, Sachet A. ; Hu, Zhuting ; Li, Letitia ; Le, Phuong M. ; Allesøe, Rosa Lundbye ; Richman, Alyssa R. ; Kowalczyk, Monika S ; Abdelrahman, Sara ; Geduldig, Jack E. ; Charbonneau, Sarah ; Pelton, Kristine ; Iorgulescu, J. Bryan ; Elagina, Liudmila ; Zhang, Wandi ; Olive, Oriol ; McCluskey, Christine ; Olsen, Lars Rønn ; Stevens, Jonathan ; Lane, William J. ; Salazar, Andres M. ; Daley, Heather ; Wen, Patrick Y. ; Chiocca, E. Antonio ; Harden, Maegan ; Lennon, Niall J. ; Gabriel, Stacey ; Getz, Gad ; Lander, Eric S. ; Regev, Aviv ; Ritz, Jerome ; Neuberg, Donna ; Rodig, Scott J. ; Ligon, Keith L. ; Suvà, Mario L. ; Wucherpfennig, Kai W. ; Hacohen, Nir ; Fritsch, Edward F. ; Livak, Kenneth J ; Ott, Patrick A ; Wu, Catherine J ; Reardon, David A.
in: Nature, vol: 565, pages: 234-239

Type: Letter (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1038/s41586-018-0792-9

  PDF

Using microarray-based subtyping methods for breast cancer in the era of high-throughput RNA sequencing

Pedersen, Christina Bligaard ; Nielsen, Finn Cilius ; Rossing, Maria ; Olsen, Lars Rønn
in: Molecular Oncology, vol: 12, issue: 12, pages: 2136-2146

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1002/1878-0261.12389