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2019
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Resistance gene-directed genome mining of 50 Aspergillus species

Kjærbølling, Inge ; Vesth, Tammi ; Andersen, Mikael R.
in: mSystems, vol: 4, issue: 4

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.1128/mSystems.00085-19

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Strategies to establish the link between biosynthetic gene clusters and secondary metabolites

Kjærbølling, Inge ; Mortensen, Uffe H. ; Vesth, Tammi ; Andersen, Mikael R.
in: Fungal Genetics and Biology, vol: 130, pages: 107-121

Type: Review (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.1016/j.fgb.2019.06.001

2018
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Linking secondary metabolites to gene clusters through genome sequencing of six diverse Aspergillus species

Kjærbølling, Inge ; Vesth, Tammi C. ; Frisvad, Jens C. ; Nybo, Jane L. ; Theobald, Sebastian ; Kuo, Alan ; Bowyer, Paul ; Matsuda, Yudai ; Mondo, Stephen ; Lyhne, Ellen K. ; Kogle, Martin E. ; Clum, Alicia ; Lipzen, Anna ; Salamov, Asaf ; Ngan, Chew Yee ; Daum, Chris ; Chiniquy, Jennifer ; Barry, Kerrie ; LaButti, Kurt ; Haridas, Sajeet ; Simmons, Blake A. ; Magnuson, Jon K. ; Mortensen, Uffe H. ; Larsen, Thomas O. ; Grigoriev, Igor V. ; Baker, Scott E. ; Andersen, Mikael R.
in: Proceedings of the National Academy of Sciences of the United States of America, vol: 115, issue: 4, pages: E753-E761

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.1073/pnas.1715954115

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Friends and foes - comparative genomics of 23 Aspergillus Flavi species

Kjærbølling, Inge ; Vesth, Tammi C. ; Nybo, Jane L. ; Theobald, Sebastian ; Frisvad, Jens C. ; Kogle, Martin E. ; Lyhne, Ellen K. ; Kuo, Allan ; Salamov, Asaf ; Riley, Robert ; Larsen, Thomas O. ; Mortensen, Uffe H. ; Grigoriev, Igor V. ; Baker, Scott E. ; Andersen, Mikael R.
Presented at:
14th European Conference on Fungal Genetics

Type: Conference abstract for conference (Peer reviewed)

Status: Published     |    Year: 2018

 

Friends and Foes -Comparative Genomics of 23 Aspergillus Flavi Species

Kjærbølling, Inge ; Vesth, Tammi C. ; Nybo, Jane L. ; Theobald, Sebastian ; Frisvad, Jens C. ; Kogle, Martin E. ; Lyhne, Ellen K. ; Sato, Atsushi ; Hainaut, Matthieu ; Drula, Elodie ; Henrissat, Bernard ; Kuo, Alan ; Salamov, Asaf ; Riley, Robert ; Mortensen, Uffe H. ; Larsen, Thomas O. ; Grigoriev, Igor V. ; Baker, Scott E. ; Andersen, Mikael R.
Presented at:
14th European Conference on Fungal Genetics

Type: Poster (Peer reviewed)

Status: Published     |    Year: 2018

 

Immense diversity found in secondary metabolite gene clusters in filamentous fungi and bacteria using comparative genomics

Vesth, Tammi ; Frisvad, Jens ; Kovács, Ákos ; Jelsbak, Lars ; Weber, Tilmann ; Baker, Scott E. ; Andersen, Mikael R.
Presented at:
17th European Conference on Computational Biology

Type: Poster (Peer reviewed)

Status: Published     |    Year: 2018

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Investigation of inter- and intraspecies variation through genome sequencing of Aspergillus section Nigri

Vesth, Tammi Camilla ; Nybo, Jane L ; Theobald, Sebastian ; Frisvad, Jens Christian ; Larsen, Thomas Ostenfeld ; Nielsen, Kristian Fog ; Hoof, Jakob Blæsbjerg ; Brandl, Julian ; Salamov, Asaf ; Riley, Robert ; Gladden, John M ; Phatale, Pallavi ; Nielsen, Morten T. ; Lyhne, Ellen K. ; Kogle, Martin Engelhard ; Strasser, Kimchi ; McDonnell, Erin ; Barry, Kerrie ; Clum, Alicia ; Chen, Cindy ; LaButti, Kurt ; Haridas, Sajeet ; Nolan, Matt ; Sandor, Laura ; Kuo, Alan ; Lipzen, Anna ; Hainaut, Matthieu ; Drula, Elodie ; Tsang, Adrian ; Magnuson, Jon K ; Henrissat, Bernard ; Wiebenga, Ad ; Simmons, Blake A ; Mäkelä, Miia R ; de Vries, Ronald P ; Grigoriev, Igor V ; Mortensen, Uffe Hasbro ; Baker, Scott E ; Andersen, Mikael Rørdam
in: Nature Genetics, vol: 50, pages: 1688–1695

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.1038/s41588-018-0246-1

 

The Aspmine - Comparative genomics analysis of 6 new species of Aspergillus section Sparsi, Ochraceorosei, Tanneri and Robusti

Vesth, Tammi ; Lind Nybo, Jane ; Theobald, Sebastian ; Frisvad, Jens ; de Vries, Ronald ; Grigoriev, Igor V. ; Baker, Scott E. ; Lyhne, Ellen K. ; Kogle, Martin E. ; Salamov, Asaf ; Kuo, Alan ; Riley, Robert ; Hainaut, Matthieu ; Andersen, Mikael R.
Presented at:
14th European Conference on Fungal Genetics

Type: Poster (Peer reviewed)

Status: Published     |    Year: 2018

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The gold-standard genome of Aspergillus niger NRRL 3 enables a detailed view of the diversity of sugar catabolism in fungi

Aguilar-Pontes, M. V. ; Brandl, J. ; McDonnell, E. ; Strasser, K. ; Nguyen, T.T.M. ; Riley, R. ; Mondo, S. ; Salamov, A. ; Nybo, J.L. ; Vesth, T.C. ; Grigoriev, I.V. ; Andersen, M.R. ; Tsang, A. ; de Vries, R.P.
in: Studies in Mycology, vol: 91, pages: 61-78

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.1016/j.simyco.2018.10.001