DTU Sundhedsteknologi
DTU Bioinformatik
Martin Closter Jespersen

Martin Closter Jespersen

PhD student

Department of Health Technology

Technical University of Denmark

Kemitorvet

Building 208, room 012

2800 Kgs. Lyngby

Ph.
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Fax +4545 93 15 85
E-mail mclje@dtu.dk
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2019
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Antibody Specific B-Cell Epitope Predictions: Leveraging Information From Antibody-Antigen Protein Complexes

Jespersen, Martin Closter ; Mahajan, Swapnil ; Peters, Bjoern ; Nielsen, Morten ; Marcatili, Paolo
in: Frontiers in Immunology, vol: 10

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.3389/fimmu.2019.00298

 

NetSurfP-2.0: Improved prediction of protein structural features by integrated deep learning

Klausen, Michael Schantz ; Jespersen, Martin Closter ; Nielsen, Henrik ; Jensen, Kamilla Kjærgaard ; Jurtz, Vanessa Isabell ; Sønderby, Casper Kaae ; Sommer, Morten Otto Alexander ; Winther, Ole ; Nielsen, Morten ; Petersen, Bent ; Marcatili, Paolo
in: Proteins: Structure, Function, and Bioinformatics, vol: 87, issue: 6, pages: 520-527

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.1002/prot.25674

2018
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Epitope Specific Antibodies and T Cell Receptors in the Immune Epitope Database

Mahajan, Swapnil ; Vita, Randi ; Shackelford, Deborah ; Lane, Jerome ; Schulten, Veronique ; Zarebski, Laura ; Jespersen, Martin Closter ; Marcatili, Paolo ; Nielsen, Morten ; Sette, Alessandro ; Peters, Bjoern
in: Frontiers in Immunology, vol: 9

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.3389/fimmu.2018.02688

2017
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BepiPred-2.0: improving sequence-based B-cell epitope prediction using conformational epitopes

Jespersen, Martin Closter ; Peters, Bjoern ; Nielsen, Morten ; Marcatili, Paolo
in: Nucleic acids research, vol: 45, issue: W1

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: https://doi.org/10.1093/nar/gkx346

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High-density peptide microarray exploration of the antibody response in a rabbit immunized with a neurotoxic venom fraction

Engmark, Mikael ; Jespersen, Martin Closter ; Lomonte, Bruno ; Lund, Ole ; Laustsen, Andreas Hougaard
in: Toxicon, vol: 138, pages: 151-158

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: https://doi.org/10.1016/j.toxicon.2017.08.028

2016
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Tools and data services registry

Ison, Jon ; Rapacki, Kristoffer ; Ménager, Hervé ; Kalaš, Matúš ; Rydza, Emil Karol ; Chmura, Piotr Jaroslaw ; Anthon, Christian ; Beard, Niall ; Berka, Karel ; Bolser, Dan ; Booth, Tim ; Bretaudeau, Anthony ; Brezovsky, Jan ; Casadio, Rita ; Cesareni, Gianni ; Coppens, Frederik ; Cornell, Michael ; Cuccuru, Gianmauro ; Davidsen, Kristian ; Vedova, Gianluca Della ; Dogan, Tunca ; Doppelt-Azeroual, Olivia ; Emery, Laura ; Gasteiger, Elisabeth ; Gatter, Thomas ; Goldberg, Tatyana ; Grosjean, Marie ; Grüning, Björn ; Helmer-Citterich, Manuela ; Ienasescu, Hans ; Ioannidis, Vassilios ; Jespersen, Martin Closter ; Jimenez, Rafael ; Juty, Nick ; Juvan, Peter ; Koch, Maximilian ; Laibe, Camille ; Li, Jing-Woei ; Licata, Luana ; Mareuil, Fabien ; Mičetić, Ivan ; Friborg, Rune Møllegaard ; Moretti, Sebastien ; Morris, Chris ; Möller, Steffen ; Nenadic, Aleksandra ; Peterson, Hedi ; Profiti, Giuseppe ; Rice, Peter ; Romano, Paolo ; Roncaglia, Paola ; Saidi, Rabie ; Schafferhans, Andrea ; Schwämmle, Veit ; Smith, Callum ; Sperotto, Maria Maddalena ; Stockinger, Heinz ; Vařeková, Radka Svobodová ; Tosatto, Silvio C. E. ; de la Torre, Victor ; Uva, Paolo ; Via, Allegra ; Yachdav, Guy ; Zambelli, Federico ; Vriend, Gert ; Rost, Burkhard ; Parkinson, Helen ; Løngreen, Peter ; Brunak, Søren
in: Nucleic acids research, vol: 44, issue: D1, pages: D38-D47

Type: Journal article (Peer reviewed)

Status: E-pub ahead of print     |    Year: 2016     |    DOI: https://doi.org/10.1093/nar/gkv1116

2015
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Epitopic Profiling of Antibody Response against Neurotoxins from the Black Mamba (Dendroaspis polylepis)

Jespersen, Martin Closter ; Engmark, Mikael ; Laustsen, Andreas Hougaard ; Marfa Gutierrez, Jose ; Lomonte, Bruno ; Andersen, Mikael Rørdam ; Lund, Ole
Presented at:
Symposium for Biological and Life Science Students (SymBLS) 2015

Type: Poster (Peer reviewed)

Status: Published     |    Year: 2015

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LYRA, a webserver for lymphocyte receptor structural modeling.

Klausen, Michael Schantz ; Anderson, Mads Valdemar ; Jespersen, Martin Closter ; Nielsen, Morten ; Marcatili, Paolo
in: Nucleic Acids Research, vol: 43, issue: W1, pages: W349-W355

Type: Journal article (Peer reviewed)

Status: E-pub ahead of print     |    Year: 2015     |    DOI: https://doi.org/10.1093/nar/gkv535