Bernhard Palsson

Bernhard Palsson

CEO

DTU BIOSUSTAIN
Novo Nordisk Foundation Center for Biosustainability

Danmarks Tekniske Universitet

Kemitorvet

Bygning 220, rum 527F

2800 Kgs. Lyngby

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2019
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Enzyme promiscuity shapes adaptation to novel growth substrates

Guzmán, Gabriela I. ; Sandberg, Troy E. ; LaCroix, Ryan A. ; Nyerges, Ákos ; Papp, Henrietta ; de Raad, Markus ; King, Zachary A. ; Hefner, Ying ; Northen, Trent R. ; Notebaart, Richard A. ; Pál, Csaba ; Palsson, Bernhard O. ; Papp, Balázs ; Feist, Adam M.
in: Molecular Systems Biology, vol: 15, issue: 4

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.15252/msb.20188462

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Expanding the uses of genome-scale models with protein structures

Mih, Nathan ; Palsson, Bernhard O.
in: Molecular Systems Biology, vol: 15, issue: 11

Type: Comment/debate (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.15252/msb.20188601

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Genome-scale model of metabolism and gene expression provides a multi-scale description of acid stress responses in Escherichia coli

Du, Bin ; Yang, Laurence ; Lloyd, Colton J. ; Fang, Xin ; Palsson, Bernhard
in: PLOS Computational Biology, vol: 15, issue: 12

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1371/journal.pcbi.1007525

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Laboratory evolution reveals a two-dimensional rate-yield tradeoff in microbial metabolism

Cheng, Chuankai ; O'Brien, Edward J. ; McCloskey, Douglas ; Utrilla, Jose ; Olson, Connor ; LaCroix, Ryan A. ; Sandberg, Troy E. ; Feist, Adam M. ; Palsson, Bernhard O. ; King, Zachary A.
in: PLOS Computational Biology, vol: 15, issue: 6

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1371/journal.pcbi.1007066

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Minimal cells, maximal knowledge

Lachance, Jean Christophe ; Rodrigue, Sébastien ; Palsson, Bernhard O.
in: eLife, vol: 8

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.7554/eLife.45379

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Primary transcriptome and translatome analysis determines transcriptional and translational regulatory elements encoded in the Streptomyces clavuligerus genome

Hwang, Soonkyu ; Lee, Namil ; Jeong, Yujin ; Lee, Yongjae ; Kim, Woori ; Cho, Suhyung ; Palsson, Bernhard O ; Cho, Byung-Kwan
in: Nucleic acids research, vol: 47, issue: 12, pages: 6114-6129

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1093/nar/gkz471

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Profiling the effect of nafcillin on HA-MRSA D712 using bacteriological and physiological media

Rajput, Akanksha ; Poudel, Saugat ; Tsunemoto, Hannah ; Meehan, Michael ; Szubin, Richard ; Olson, Connor A. ; Lamsa, Anne ; Seif, Yara ; Dillon, Nicholas ; Vrbanac, Alison ; Sugie, Joseph ; Dahesh, Samira ; Monk, Jonathan M. ; Dorrestein, Pieter C. ; Knight, Rob ; Nizet, Victor ; Palsson, Bernhard O. ; Feist, Adam M.
in: Scientific Data, vol: 6, issue: 1

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1038/s41597-019-0331-z

 

Pseudogene repair driven by selection pressure applied in experimental evolution

Anand, Amitesh ; Olson, Connor A. ; Yang, Laurence ; Sastry, Anand V. ; Catoiu, Edward ; Choudhary, Kumari Sonal ; Phaneuf, Patrick V. ; Sandberg, Troy E. ; Xu, Sibei ; Hefner, Ying ; Szubin, Richard ; Feist, Adam ; Palsson, Bernhard
in: Nature Microbiology, vol: 4, issue: 3, pages: 386-389

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1038/s41564-018-0340-2

 

Strain-Specific Metabolic Requirements Revealed by a Defined Minimal Medium for Systems Analyses of Staphylococcus aureus

Machado, Henrique ; Weng, Liam L. ; Dillon, Nicholas ; Seif, Yara ; Holland, Michelle ; Pekar, Jonathan E. ; Monk, Jonathan M. ; Nizet, Victor ; Palsson, Bernhard O. ; Feist, Adam M.
in: Applied and Environmental Microbiology, vol: 85, issue: 21, pages: 1-13

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1128/aem.01773-19

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Synthetic biology tools for novel secondary metabolite discovery in streptomyces

Lee, Namil ; Hwang, Soonkyu ; Lee, Yongjae ; Cho, Suhyung ; Palsson, Bernhard
in: Journal of Microbiology and Biotechnology, vol: 29, issue: 5, pages: 667-686

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.4014/jmb.1904.04015