Sünje Johanna Pamp

Sünje Johanna Pamp

Lektor

DTU FØDEVAREINSTITUTTET
DTU Fødevareinstituttet

Afdelingen for Global Overvågning
Forskningsgruppen for Genetisk Epidemiologi

Danmarks Tekniske Universitet

Kemitorvet

Bygning 204, rum 103

2800 Kgs. Lyngby

Hjemmeside

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Publikationer
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CV
DTU nyheder
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2020
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Addressing Learning Needs on the Use of Metagenomics in Antimicrobial Resistance Surveillance

Ribeiro Duarte, Ana Sofia ; Stärk, Katharina D. C. ; Munk, Patrick ; Leekitcharoenphon, Pimlapas ; Bossers, Alex ; Luiken, Roosmarijn ; Sarrazin, Steven ; Lukjancenko, Oksana ; Pamp, Sünje Johanna ; Bortolaia, Valeria ; Nissen, Jakob Nybo ; Kirstahler, Philipp ; Van Gompel, Liese ; Poulsen, Casper Sahl ; Kaas, Rolf Sommer ; Hellmér, Maria ; Hansen, Rasmus Borup ; Gomez, Violeta Munoz ; Hald, Tine
in: Frontiers in Public Health, vol: 8

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.3389/fpubh.2020.00038

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Erratum: Application of shotgun metagenomics to smoked salmon experimentally spiked: Comparison between sequencing and microbiological data using different bioinformatic approaches (Italian Journal of Food Safety, (2019), 8, 4)

De Cesare, Alessandra ; Oliveri, Chiara ; Lucchi, Alex ; Pasquali, Frederique ; Pamp, Sünje Johanna ; Mordhorst, Hanne ; Wylezich, Claudia ; Poulsen, Casper Sahl ; Manfreda, Gerardo
in: Italian Journal of Food Safety, vol: 9, issue: 1

Type: Comment/debate (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.4081/ijfs.2020.8991

 

Gastrointestinal toxicity during induction treatment for childhood acute lymphoblastic leukemia: The impact of the gut microbiota

De Pietri, Silvia ; Ingham, Anna Cäcilia ; Frandsen, Thomas L. ; Rathe, Mathias ; Krych, Lukasz ; Castro‐Mejía, Josue L. ; Nielsen, Dennis S. ; Nersting, Jacob ; Wehner, Peder S. ; Schmiegelow, Kjeld ; Hasle, Henrik ; Pamp, Sünje Johanna ; Müller, Klaus
in: International Journal of Cancer, vol: 147, issue: 7, pages: 1953-1962

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1002/ijc.32942

2019
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Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage

Hendriksen, Rene S. ; Munk, Patrick ; Njage, Patrick Murigu Kamau ; van Bunnik, Bram ; McNally, Luke ; Lukjancenko, Oksana ; Röder, Timo ; Nieuwenhuijse, David ; Karlsmose Pedersen, Susanne ; Kjeldgaard, Jette Sejer ; Kaas, Rolf Sommer ; Clausen, Philip Thomas Lanken Conradsen ; Vogt, Josef Korbinian ; Leekitcharoenphon, Pimlapas ; van de Schans, Milou G M ; Zuidema, Tina ; de Roda Husman, Ana Maria ; Rasmussen, Simon ; Petersen, Bent ; Global, Sewage Surveillance project consortium ; Amid, Clara ; Cochrane, Guy ; Sicheritz-Pontén, Thomas ; Schmitt, Heike ; Alvarez, Jorge Raul Matheu ; Aidara-Kane, Awa ; Pamp, Sünje Johanna ; Lund, Ole ; Hald, Tine ; Woolhouse, Mark ; Koopmans, Marion P ; Vigre, Håkan ; Petersen, Thomas Nordahl ; Aarestrup, Frank Møller
in: Nature Communications, vol: 10

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1038/s41467-019-08853-3

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Pathogen surveillance in the informal settlement, Kibera, Kenya, using a metagenomics approach

Hendriksen, Rene S. ; Lukjancenko, Oksana ; Munk, Patrick ; Hjort Hjelmsø, Mathis ; Verani, Jennifer R. ; Ng'eno, Eric ; Bigogo, Godfrey ; Kiplangat, Samuel ; Oumar, Traoré ; Bergmark, Lasse ; Röder, Timo ; Neatherlin, John C. ; Clayton, Onyango ; Hald, Tine ; Karlsmose, Susanne ; Pamp, Sünje Johanna ; Fields, Barry ; Montgomery, Joel M. ; Møller Aarestrup, Frank
in: P L o S One, vol: 14, issue: 10

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1371/journal.pone.0222531

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Specific gut microbiome members are associated with distinct immune markers in pediatric allogeneic hematopoietic stem cell transplantation

Ingham, Anna Cäcilia ; Kielsen, Katrine ; Cilieborg, Malene Skovsted ; Lund, Ole ; Holmes, Susan ; Møller Aarestrup, Frank ; Müller, Klaus Gottlob ; Pamp, Sünje Johanna
in: Microbiome, vol: 7, issue: 1

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1186/s40168-019-0745-z

2018
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Abundance and diversity of the faecal resistome in slaughter pigs and broilers in nine European countries

Munk, Patrick ; Knudsen, Berith Elkær ; Lukjacenko, Oksana ; Duarte, Ana Sofia Ribeiro ; Van Gompel, Liese ; Luiken, Roosmarijn E.C. ; Smit, Lidwien A.M. ; Schmitt, Heike ; Garcia, Alejandro Dorado ; Hansen, Rasmus Borup ; Petersen, Thomas Nordahl ; Bossers, Alex ; Ruppé, Etienne ; Graveland, Haitske ; van Essen, Alieda ; Gonzalez-Zorn, Bruno ; Moyano, Gabriel ; Sanders, Pascal ; Chauvin, Claire ; David, Julie ; Battisti, Antonio ; Caprioli, Andrea ; Dewulf, Jeroen ; Blaha, Thomas ; Wadepohl, Katharina ; Brandt, Maximiliane ; Wasyl, Dariusz ; Skarzyńska, Magdalena ; Zajac, Magdalena ; Daskalov, Hristo ; Saatkamp, Helmut W. ; Stärk, Katharina D.C. ; Lund, Ole ; Hald, Tine ; Pamp, Sünje Johanna ; Vigre, Håkan ; Heederik, Dick ; Wagenaar, Jaap A. ; Mevius, Dik ; Møller Aarestrup, Frank ; ,
in: Nature Microbiology, vol: 3, issue: 8, pages: 898-908

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1038/s41564-018-0192-9

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Genomics-Based Identifcation of Microorganisms in Human Ocular Body Fluid

Kirstahler, Philipp ; Solborg Bjerrum, Søren ; Friis-Møller, Alice ; Dornonville de la Cour, Morten ; Aarestrup, Frank Møller ; Westh, Henrik T. ; Pamp, Sünje Johanna
in: Scientific Reports, vol: 8

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1038/s41598-018-22416-4

2017
2016