Bernhard Palsson

Bernhard Palsson

CEO

DTU BIOSUSTAIN
Novo Nordisk Foundation Center for Biosustainability

Danmarks Tekniske Universitet

Kemitorvet

Bygning 220, rum 527F

2800 Kgs. Lyngby

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2020
 

Adaptive laboratory evolution of Escherichia coli under acid stress

Du, Bin ; Olson, Connor A. ; Sastry, Anand V ; Fang, Xin ; Phaneuf, Patrick V. ; Chen, Ke ; Wu, Muyao ; Szubin, Richard ; Xu, Sibei ; Gao, Ye ; Hefner, Ying ; Feist, Adam M ; Palsson, Bernhard O
in: Microbiology, vol: 166, issue: 2

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1099/mic.0.000867

 

An atlas of human metabolism

Robinson, Jonathan L. ; Kocabaş, Pınar ; Wang, Hao ; Cholley, Pierre Etienne ; Cook, Daniel ; Nilsson, Avlant ; Anton, Mihail ; Ferreira, Raphael ; Domenzain, Iván ; Billa, Virinchi ; Limeta, Angelo ; Hedin, Alex ; Gustafsson, Johan ; Kerkhoven, Eduard J. ; Svensson, L. Thomas ; Palsson, Bernhard O. ; Mardinoglu, Adil ; Hansson, Lena ; Uhlén, Mathias ; Nielsen, Jens
in: Science Signaling, vol: 13, issue: 624

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1126/scisignal.aaz1482

 

A workflow for generating multi-strain genome-scale metabolic models of prokaryotes

Norsigian, Charles J. ; Fang, Xin ; Seif, Yara ; Monk, Jonathan M. ; Palsson, Bernhard O.
in: Nature Protocols, vol: 15, issue: 1, pages: 1-14

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1038/s41596-019-0254-3

  PDF

BiGG Models 2020: multi-strain genome-scale models and expansion across the phylogenetic tree

Norsigian, Charles J. ; Pusarla, Neha ; McConn, John Luke ; Yurkovich, James T. ; Dräger, Andreas ; Palsson, Bernhard O. ; King, Zachary
in: Nucleic acids research, vol: 48, issue: 1, pages: D402-D406

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1093/nar/gkz1054

 

Directed Metabolic Pathway Evolution Enables Functional Pterin-Dependent Aromatic-Amino-Acid Hydroxylation in Escherichia coli

Luo, Hao ; Yang, Lei ; Kim, Se Hyeuk ; Wulff, Tune ; Feist, Adam M. ; Herrgard, Markus ; Palsson, Bernhard
in: ACS Synthetic Biology, vol: 9, issue: 3, pages: 494-499

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1021/acssynbio.9b00488

  PDF

Genome-scale reconstructions of the mammalian secretory pathway predict metabolic costs and limitations of protein secretion

Gutierrez, Jahir M ; Feizi, Amir ; Li, Shangzhong ; Kallehauge, Thomas B ; Hefzi, Hooman ; Grav, Lise Marie ; Ley, Daniel ; Baycin Hizal, Deniz ; Betenbaugh, Michael J ; Voldborg, Bjørn Gunnar ; Kildegaard, Helene Faustrup ; Min Lee, Gyun ; Palsson, Bernhard O ; Nielsen, Jens ; Lewis, Nathan E
in: Nature Communications, vol: 11, issue: 1

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1038/s41467-019-13867-y

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Iron competition triggers antibiotic biosynthesis in Streptomyces coelicolor during coculture with Myxococcus xanthus

Lee, Namil ; Kim, Woori ; Chung, Jinkyoo ; Lee, Yongjae ; Cho, Suhyung ; Jang, Kyoung-Soon ; Kim, Sun Chang ; Palsson, Bernhard ; Cho, Byung-Kwan
in: ISME Journal, vol: 14, pages: 1111–1124

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1038/s41396-020-0594-6

  PDF

Metabolic and genetic basis for auxotrophies in Gram-negative species

Seif, Yara ; Choudhary, Kumari Sonal ; Hefner, Ying ; Anand, Amitesh ; Yang, Laurence ; Palsson, Bernhard O.
in: Proceedings of the National Academy of Sciences of the United States of America, vol: 117, issue: 11, pages: 6264-6273

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1073/pnas.1910499117

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Multiplex secretome engineering enhances recombinant protein production and purity

Kol, Stefan ; Ley, Daniel ; Wulff, Tune ; Decker, Marianne ; Arnsdorf, Johnny ; Schoffelen, Sanne ; Hansen, Anders Holmgaard ; Jensen, Tanja Lyholm ; Gutierrez, Jahir M. ; Chiang, Austin W. T. ; Masson, Helen O. ; Palsson, Bernhard O. ; Voldborg, Bjørn Gunnar ; Pedersen, Lasse Ebdrup ; Kildegaard, Helene Faustrup ; Min Lee, Gyun ; Lewis, Nathan E.
in: Nature Communications, vol: 11, issue: 1

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1038/s41467-020-15866-w

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Thirty complete Streptomyces genome sequences for mining novel secondary metabolite biosynthetic gene clusters

Lee, Namil ; Kim, Woori ; Hwang, Soonkyu ; Lee, Yongjae ; Cho, Suhyung ; Palsson, Bernhard ; Cho, Byung Kwan
in: Scientific Data, vol: 7

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1038/s41597-020-0395-9