Philip Thomas Lanken Conradsen Clausen

Philip Thomas Lanken Conradsen Clausen

Ph.d.-studerende

DTU FØDEVAREINSTITUTTET
DTU Fødevareinstituttet

Forskningsgruppen for Genetisk Epidemiologi

Danmarks Tekniske Universitet

Kemitorvet

Bygning 204, rum 107

2800 Kgs. Lyngby

Hjemmeside

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Publikationer
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2019
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Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage

Hendriksen, Rene S. ; Munk, Patrick ; Njage, Patrick Murigu Kamau ; van Bunnik, Bram ; McNally, Luke ; Lukjancenko, Oksana ; Röder, Timo ; Nieuwenhuijse, David ; Karlsmose Pedersen, Susanne ; Kjeldgaard, Jette Sejer ; Kaas, Rolf Sommer ; Clausen, Philip Thomas Lanken Conradsen ; Vogt, Josef Korbinian ; Leekitcharoenphon, Pimlapas ; van de Schans, Milou G M ; Zuidema, Tina ; de Roda Husman, Ana Maria ; Rasmussen, Simon ; Petersen, Bent ; Global, Sewage Surveillance project consortium ; Amid, Clara ; Cochrane, Guy ; Sicheritz-Pontén, Thomas ; Schmitt, Heike ; Alvarez, Jorge Raul Matheu ; Aidara-Kane, Awa ; Pamp, Sünje Johanna ; Lund, Ole ; Hald, Tine ; Woolhouse, Mark ; Koopmans, Marion P ; Vigre, Håkan ; Petersen, Thomas Nordahl ; Aarestrup, Frank Møller
in: Nature Communications, vol: 10

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1038/s41467-019-08853-3

 

LRE-Finder, a Web tool for detection of the 23S rRNA mutations and the optrA, cfr, cfr(B) and poxtA genes encoding linezolid resistance in enterococci from whole-genome sequences

Hasman, Henrik ; Clausen, Philip Thomas Lanken Conradsen ; Kaya, Hülya ; Hansen, Frank ; Knudsen, Jenny Dahl ; Wang, Mikala ; Holzknecht, Barbara Juliane ; Samulioniené, Jurgita ; Røder, Bent L ; Frimodt-Møller, Niels ; Lund, Ole ; Hammerum, Anette Marie
in: Journal of Antimicrobial Chemotherapy, vol: 74, issue: 6, pages: 1473-1476

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1093/jac/dkz092

2018
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Improved ontology for eukaryotic single-exon coding sequences in biological databases

Jorquera, Roddy ; González, Carolina ; Clausen, Philip ; Petersen, Bent ; Holmes, David S
in: Database, vol: 2018, issue: 1

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1093/database/bay089

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Rapid and precise alignment of raw reads against redundant databases with KMA

Clausen, Philip Thomas Lanken Conradsen ; Aarestrup, Frank Møller ; Lund, Ole
in: B M C Bioinformatics, vol: 19, issue: 1

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1186/s12859-018-2336-6

2016
 

Benchmarking of methods for identification of antimicrobial resistance genes in bacterial whole genome data

Clausen, Philip T. L. C. ; Zankari, Ea ; Aarestrup, Frank Møller ; Lund, Ole
in: Journal of Antimicrobial Chemotherapy, vol: 71, issue: 9, pages: 2484-2488

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: https://doi.org/10.1093/jac/dkw184