ASM Shihavuddin

ASM Shihavuddin

Assistant Professor

DTU COMPUTE
Department of Applied Mathematics and Computer Science

Technical University of Denmark

Richard Petersens Plads

Building 324, room 130

2800 Kgs. Lyngby

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Publications
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2018
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Ependymal cilia beating induces an actin network to protect centrioles against shear stress

Mahuzier, Alexia ; Shihavuddin, Asm ; Fournier, Clémence ; Lansade, Pauline ; Faucourt, Marion ; Menezes, Nikita ; Meunier, Alice ; Garfa-Traoré, Meriem ; Carlier, Marie France ; Voituriez, Raphael ; Genovesio, Auguste ; Spassky, Nathalie ; Delgehyr, Nathalie
in: Nature Communications, vol: 9, issue: 1, 2011

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.1038/s41467-018-04676-w

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Can we train a single deep learning model to detect and segment nuclei images acquired with any microscope or staining modality?

Shihavuddin, ASM ; Gawrilowicz, Florian ; Jeppesen, Niels ; Paulsen, Rasmus Reinhold
Presented at:
69th Annual Conference of the Nordic Microscopy Society

Type: Conference abstract for conference (Peer reviewed)

Status: Published     |    Year: 2018

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FastSME: faster and smoother manifold extraction from 3D stack

Basu, Sreetama ; Rexhepaj, Elton ; Spassky, Nathalie ; Genovesio, Auguste ; Paulsen, Rasmus Reinhold ; Shihavuddin, ASM
part of: Proceedings of the IEEE 2018 Conference on Computer Vision and Pattern Recognition, 2018, IEEE
Presented at:
2018 Conference on Computer Vision and Pattern Recognition

Type: Article in proceedings (Peer reviewed)

Status: Published     |    Year: 2018

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Towards Highly Accurate Coral Texture Images Classification Using Deep Convolutional Neural Networks and Data Augmentation

Gómez-Ríos, Anabel ; Tabik, Siham ; Luengo, Julían ; Shihavuddin, ASM ; Krawczyk, Bartosz ; Herrera, Francisco
in: Expert Systems with Applications, 2011

Type: Journal article (Peer reviewed)

Status: Submitted     |    Year: 2018

2017
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Calibrated mitotic oscillator drives motile ciliogenesis

Al Jord, Adel ; Shihavuddin, Asm ; D’Aout, Raphaël Servignat ; Faucourt, Marion ; Genovesio, Auguste ; Karaiskou, Anthi ; Sobczak-Thépot, Joëlle ; Spassky, Nathalie ; Meunier, Alice
in: Science, vol: 358, issue: 6364, pages: 803-806, 2011

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: https://doi.org/10.1126/science.aan8311

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Smooth 2D manifold extraction from 3D image stack

Shihavuddin, Asm ; Basu, Sreetama ; Rexhepaj, Elton ; Delestro, Felipe ; Menezes, Nikita ; Sigoillot, Séverine M. ; Del Nery, Elaine ; Selimi, Fekrije ; Spassky, Nathalie ; Genovesio, Auguste
in: Nature Communications, vol: 8, 2011

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: https://doi.org/10.1038/ncomms15554

 

Computer Vision in Vehicle Technology: Land, Sea & Air

Gracias, Nuno ; Garcia, Rafael ; Shihavuddin, ASM ; Campos, Ricard ; Hurtos, Natalia ; Prados, Ricard ; Nicosevici, Tudor Nicosevici ; Elibol, Armagan ; Neumann, Laszlo ; Escartin, Javier
part of: Computer Vision in Vehicle Technology: Land, Sea, and Air, pages: 133-160, 2017, Wiley

Type: Book chapter (Peer reviewed)

Status: Published     |    Year: 2017

 

mTORC1 signaling and primary cilia are required for brain ventricle morphogenesis

Foerster, Philippe ; Daclin, Marie ; Shihavuddin, Asm ; Faucourt, Marion ; Boletta, Alessandra ; Genovesio, Auguste ; Spassky, Nathalie
in: Journal of Cell Science, vol: 130, issue: 3, pages: 201-210

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: https://doi.org/10.1242/dev.138271