Johanne Ahrenfeldt

Johanne Ahrenfeldt

Ph.d.-studerende

DTU BIOINFORMATIK
Institut for Bio- og Sundhedsinformatik

Genomic Epidemiology
DTU Bioinformatics Employees

Danmarks Tekniske Universitet

Kemitorvet

Bygning 208, rum 063

2800 Kgs. Lyngby

Tlf.
Tlf.
Fax 45 93 15 85
E-mail johah@cbs.dtu.dk
ORCID 0000-0001-9175-0373
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Publikationer
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2017
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Bacterial whole genome-based phylogeny: construction of a new benchmarking dataset and assessment of some existing methods

Ahrenfeldt, Johanne ; Skaarup, Carina ; Hasman, Henrik ; Pedersen, Anders Gorm ; Aarestrup, Frank Møller ; Lund, Ole
in journal: BMC Genomics (ISSN: 1471-2164) (DOI: http://dx.doi.org/10.1186/s12864-016-3407-6), vol: 18, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: http://dx.doi.org/10.1186/s12864-016-3407-6

 

Norwegian patients and retail chicken meat share cephalosporin-resistant Escherichia coli and IncK/blaCMY-2 resistance plasmids

Berg, E. S. ; Wester, A. L. ; Ahrenfeldt, Johanne ; Mo, S. S. ; Slettemeås, J. S. ; Steinbakk, M ; Samuelsen, Ø. ; Grude, N. ; Simonsen, G. S. ; Løhr, I. H. ; Jørgensen, S. B. ; Tofteland, S. ; Lund, Ole ; Dahle, U. R. ; Sunde, M.
in journal: Clinical Microbiology and Infection (ISSN: 1198-743X) (DOI: http://dx.doi.org/10.1016/j.cmi.2016.12.035), 2017

Type: Journal article (Peer reviewed)

Status: E-pub ahead of print     |    År: 2017     |    DOI: http://dx.doi.org/10.1016/j.cmi.2016.12.035

2016
 

Benchtop Whole-Genome Sequencing for Identification of Nosocomial Outbreaks in Tanzania

Sonda, Tolbert ; Kumburu, Happiness ; Zwetselaar, Marco van ; Ahrenfeldt, Johanne ; Alifrangis, Michael ; Lund, Ole ; Kibiki, Gibson ; Aarestrup, Frank Møller
in journal: Infection Control & Hospital Epidemiology (ISSN: 0899-823X) (DOI: http://dx.doi.org/10.1017/ice.2016.28), vol: 37, issue: 5, pages: 622-623, 2016

Type: Comment/debate (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.1017/ice.2016.28

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A Bacterial Analysis Platform: An Integrated System for Analysing Bacterial Whole Genome Sequencing Data for Clinical Diagnostics and Surveillance

Thomsen, Martin Christen Frølund ; Ahrenfeldt, Johanne ; Bellod Cisneros, Jose Luis ; Jurtz, Vanessa Isabell ; Larsen, Mette Voldby ; Hasman, Henrik ; Aarestrup, Frank Møller ; Lund, Ole
in journal: P L o S One (ISSN: 1932-6203) (DOI: http://dx.doi.org/10.1371/journal.pone.0157718), vol: 11, issue: 6, 2016

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: http://dx.doi.org/10.1371/journal.pone.0157718

2015
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Genomic Epidemiology

Lund, Ole ; Thomsen, Martin Christen Frølund ; Bellod Cisneros, Jose Luis ; Ahrenfeldt, Johanne ; Tetzschner, Anna Maria Malberg ; Leekitcharoenphon, Pimlapas ; Kaas, Rolf Sommer ; Lukjancenko, Oksana ; Aarestrup, Frank Møller
part of: Book of Abstracts. DTU's Sustain Conference 2015, 2015, Technical University of Denmark, Lyngby
Presented at:
DTU Sustain Conference 2015, 2015, Lyngby

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    År: 2015