DTU Sundhedsteknologi
DTU Bioinformatik
Paolo Marcatili

Paolo Marcatili

Groupleader, Associate Professor

Department of Health Technology

Technical University of Denmark

Kemitorvet

Building 208, room 012

2800 Kgs. Lyngby

Ph.
Fax +45 45 93 15 85
E-mail pamar@dtu.dk
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2020
 

Emulsifying peptides from potato protein predicted by bioinformatics: Stabilization of fish oil-in-water emulsions

García Moreno, Pedro Jesús ; Jacobsen, Charlotte ; Marcatili, Paolo ; Gregersen, Simon ; Overgaard, Michael T. ; Andersen, Mogens L. ; Sørensen, Ann-Dorit Moltke ; Hansen, Egon Bech
in: Food Hydrocolloids, vol: 101

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2020     |    DOI: https://doi.org/10.1016/j.foodhyd.2019.105529

2019
  PDF

Antibody Specific B-Cell Epitope Predictions: Leveraging Information From Antibody-Antigen Protein Complexes

Jespersen, Martin Closter ; Mahajan, Swapnil ; Peters, Bjoern ; Nielsen, Morten ; Marcatili, Paolo
in: Frontiers in Immunology, vol: 10

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.3389/fimmu.2019.00298

  PDF

Identifying useful peptides derived from seaweed, potato and single cell protein with emulsifying properties.

Yesiltas, Betül ; Lægsgaard, L. ; Brinch, M. L. ; Hansen, Egon Bech ; Jacobsen, Charlotte ; Marcatili, Paolo ; Olsen, T. H. ; Gregersen, S. ; García Moreno, Pedro Jesús
Presented at:
30th Nordic Lipidpforum Symposium 2019

Type: Conference abstract for conference (Peer reviewed)

Status: Published     |    Year: 2019

  PDF

IEDB-AR: immune epitope database-analysis resource in 2019

Dhanda, Sandeep Kumar ; Mahajan, Swapnil ; Paul, Sinu ; Yan, Zhen ; Kim, Haeuk ; Jespersen, Martin Closter ; Jurtz, Vanessa ; Andreatta, Massimo ; Greenbaum, Jason A. ; Marcatili, Paolo ; Sette, Alessandro ; Nielsen, Morten ; Peters, Bjoern
in: Nucleic acids research, vol: 47, issue: 1, pages: W502-W506

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.1093/nar/gkz452

  PDF

Immunoglobulin G structure and rheumatoid factor epitopes

Maibom-Thomsen, Sheila Lefoli ; Trier, Nicole Hartwig ; Holm, Bettina Eide ; Hansen, Kirsten Beth ; Rasmussen, Morten Ib ; Chailyan, Anna ; Marcatili, Paolo ; Højrup, Peter ; Houen, Gunnar
in: PLOS ONE, vol: 14, issue: 6

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.1371/journal.pone.0217624

 

NetSurfP-2.0: Improved prediction of protein structural features by integrated deep learning

Klausen, Michael Schantz ; Jespersen, Martin Closter ; Nielsen, Henrik ; Jensen, Kamilla Kjærgaard ; Jurtz, Vanessa Isabell ; Sønderby, Casper Kaae ; Sommer, Morten Otto Alexander ; Winther, Ole ; Nielsen, Morten ; Petersen, Bent ; Marcatili, Paolo
in: Proteins: Structure, Function, and Bioinformatics, vol: 87, issue: 6, pages: 520-527

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.1002/prot.25674

 

The ABCD database: a repository for chemically defined antibodies

Lima, Wanessa C. ; Gasteiger, Elisabeth ; Marcatili, Paolo ; Duek, Paula ; Bairoch, Amos ; Cosson, Pierre
in: Nucleic acids research

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    Year: 2019     |    DOI: https://doi.org/10.1093/nar/gkz714

2018
 

AnOxPe-pred: Using deep learning for the prediction of antioxidative properties of peptides.

Olsen, Tobias Hegelund ; Pertseva, Margarita ; García Moreno, Pedro Jesús ; Jacobsen, Charlotte ; Lund, Ole ; Hansen, Egon Bech ; Marcatili, Paolo
part of: Sustain Conference 2018, 2018, Technical University of Denmark, Lyngby, Denmark
Presented at:
Sustain conference 2018: Creating Technology for a Sustainable Society

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    Year: 2018

  PDF

Automated shape-based clustering of 3D immunoglobulin protein structures in chronic lymphocytic leukemia

Polychronidou, Eleftheria ; Kalamaras, Ilias ; Agathangelidis, Andreas ; Sutton, Lesley Ann ; Yan, Xiao Jie ; Bikos, Vasilis ; Vardi, Anna ; Mochament, Konstantinos ; Chiorazzi, Nicholas ; Belessi, Chrysoula ; Rosenquist, Richard ; Ghia, Paolo ; Stamatopoulos, Kostas ; Vlamos, Panayiotis ; Chailyan, Anna ; Overby, Nanna ; Marcatili, Paolo ; Hatzidimitriou, Anastasia ; Tzovaras, Dimitrios
in: BMC Bioinformatics, vol: 19, issue: Suppl. 14
Presented at:
5th International Work-Conference on Bioinformatics and Biomedical Engineering, IWBBIO 2017, Granada, Spain, April 26–28, 2017

Type: Conference article (Peer reviewed)

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.1186/s12859-018-2381-1

  PDF

Emulsifying properties of potato peptides

García-Moreno, Pedro J. ; Atak, Merve ; Marcatili, Paolo ; Jacobsen, Charlotte ; Hansen, Egon B.
Presented at:
17th Food Colloids Conference : Application of Soft Matter Concepts

Type: Conference abstract for conference (Peer reviewed)

Status: Published     |    Year: 2018